Eleginops maclovinus (Patagonian blennie): 134878316
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Entry
134878316 CDS
T09869
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04514
Cell adhesion molecule (CAM) interaction
emac04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134878316 (lrrc4ba)
04517 IgSF CAM signaling
134878316 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
emac04515
]
134878316 (lrrc4ba)
Cell adhesion molecules [BR:
emac04515
]
Immunoglobulin superfamily
NGL family
134878316 (lrrc4ba)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
VEGFR1-3_N_Ig-like
Ig_6
Motif
Other DBs
NCBI-GeneID:
134878316
NCBI-ProteinID:
XP_063760340
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Position
16:11523910..11549959
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AA seq
732 aa
AA seq
DB search
MRIATLTCLPGHSPLLFLLAQLLLRLLLPGPELVRAASACPSLCTCSNQASRVICTRQNL
DEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPLLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYKVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETSETPGEEHPARVDINQTLIRVLSGP
TPSSHLWPGGVSTTASSLSAGWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVT
QSGSSGIGGGQSLRLHHPEMVNLPNLARSEHLNHYYKTHHFNNNMMSLGMGTGMGLNNNN
NPSPCSQSQNTSISCSQVPTSGGAPTGGTLTSPVPLPQLGLHSSLKGLMGKSQNEPLLFK
SSSKENVQETQI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggccattcccccctcctctttctattggcc
cagctgctactgcggctcctcctccctgggccggagctggtgcgagccgcctccgcctgc
ccctccctctgcacctgctcaaaccaggccagccgagtcatctgcaccaggcagaacctg
gatgaggtacccgaaagcatatcagtcaacacacgatacctcaacctgcaggaaaactcg
atacaggttatcaagtcagacactttcaagcacttgaggcacctcgagattctccagctc
tcaaagaatcagatccgtcagattgaagttggagcattcaatggcctccccaacctcaac
acactggagctcttcgacaaccgcctcacattggtgccatcacatgccttcgagtacctc
agcaagttgcgggagctgtggctgcgcaacaaccccattgagactctaccaggctatgcc
ttccaccgagtgccctcacttaggcgcctggaccttggtgagctcaagaagttggatttc
atctctgatgcagcctttgttggcctcatcaatctacgctaccttaacctgggcatgtgc
gggctgaaagacattcccaaactgacagcccttgtgcgtttggaggagctcgagctgtct
ggaaaccgactggaaatcattcgacccggttctttccagggccttgtgtctctccgtaag
ctgtggcttatgcactcacaggtgtccgtcattgagcgcaatgccttcgatgacctaaaa
aatctggaggagcttaacctctcccataactccctgcactccttgcctcatgacctcttc
acgcccctacaccagctggagagggtacaccttaaccataacccctggatctgcaactgt
gatgtcctttggttaagttggtggttgaaagagacggtgcctagcaacaccacatgctgt
gcccgctgccacgctcccccattactaaagggcaagtacattggagagcttgaccagagc
cacttcacttgctatgcaccggtcattgtggagccgcctacagacctcaatgttaccgag
ggtatggccgctgagctcaagtgtcgcacaagcacctccacaacatctgtcaactggatc
acccctaatggcactctaatgactcatggttcttacaaggtgcggatatccgtcctgcat
gatggcacacttaacttcacaaatgtgaccctgcgtgacacgggccagtacacctgcatg
gtaaccaatgctgctggcaataccacggcaactgctgtccttaatgtcactgctgctgat
gccagtgtcaactacacctactttacaacagtcacagtggaaacatcggagaccccagga
gaagagcatcctgcgcgggtagacatcaatcagacattaatccgtgttttatctggcccc
acgccctcgagccacctctggcctggaggtgtttctaccacagcctcctctctatcagca
ggctggtcttcctcctctcctcgtgcaacccgacccacgttcactgtgcccatcactgaa
ccaggcttctcaggcctggacgatgtgatgaagaccacaaagatcatcattggctgcttt
gtagccatcacattcatggcagcggtgatgttagtggtgttctacaagctgaggaagcag
caccagctgcataaacaccatggtcctgcccgtgccatcgagatcatcaatgtggaggat
gagcttggggccggagccagtggtaggggcagcggtatctcaggaggctccacggtaacg
cagagtggaagcagtggaataggagggggacagagcctcaggctgcaccacccagagatg
gtcaacttgccgaacctggcacgttcagagcacctcaaccactactacaaaactcatcac
ttcaacaacaacatgatgagcctgggcatgggcacgggcatgggactcaacaacaacaac
aacccctcaccttgctcccagtctcagaacacctccatatcttgttcccaggttccaacc
agtggaggagcacccacaggtggcaccttgacctcccctgtgcccctgccccagttgggt
ctccacagttctctgaaaggccttatgggaaaaagccagaatgagcccctgctttttaag
agcagctcaaaggaaaatgtgcaagagactcaaatttga
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