Eleginops maclovinus (Patagonian blennie): 134878522
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Entry
134878522 CDS
T09869
Symbol
ciita
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
emac01001
]
134878522 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
emac04054
]
134878522 (ciita)
Enzymes [BR:
emac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
134878522 (ciita)
Protein kinases [BR:
emac01001
]
Serine/threonine kinases: Other
TAF1 family
134878522 (ciita)
Pattern recognition receptors [BR:
emac04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
134878522 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
AAA_16
LRR_14
nSTAND3
AAA_22
NPHP3_N
TsaE
Roc
Motif
Other DBs
NCBI-GeneID:
134878522
NCBI-ProteinID:
XP_063760676
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All DBs
Position
16:19048376..19062449
Genome browser
AA seq
1631 aa
AA seq
DB search
MAQFVEVLDRVQEALTQSSPAQIHALLQRLVEEQIISEAYIRSLGLYQLSDRMAPAACKL
RSDLISSQGSTSDCNLNQGQLSQVRECDQTRLEFEPSGAEHDCTGPTPKMDPLSEHQGYN
PKFIQELGGGPVMDNHCLNHRLSSTSIISDYKCGVTLDGEMTELQRGAKIVQKLLGDSEM
TIDEGNLEDDKEWLEQVEEAARRIAVPLWQHWDRGQSIFLPLLTVITAGCAERENTTTER
EAQCHVFNMEEETELALACRTLDLYGDSFNFTDADSRFMLDTEGSAGTAESPYFPTDDGL
ASTDLNQFFTSETGRKVSPDLDVCRAADGSTTDLLCLMEDIQWGTDIGFTEDITHLLSPC
TPTDTYTDTQDQSFYSNTDQSMTLGISNDAENVLKTSCGTNTCMTDGSRSLHWNKEDEEG
VDLHCGATMQEVEQDPFLCPFDLPDDLSEILTEDLLRIFVELDPDRLFDDPLLNCEDELI
TCTDLPMPMELPILDSQQQGEEDKPTDKTNRRSKRPRASGIQQCPDEDTPSRPKRRRAAA
RPKPKVAQPEPVITQATGSESSSADTAGLSTTPPTILHLHPSIQFITIPEAPSCQVVQTL
RLSPSVITFPIPNTAATPTYIFVPAASPQFKPQVPPLSPTNGEVAPVQMSSSPRGSLSET
ASKAITHPCASPISPSNEPSTCKESPFPVLDIPQVVKDYIQEVKEYMSQACLVMEDGLTL
TSHYVDVQVSQREILHSGKNTNKALDKELVSMGDTDRQKSLLGRSQIFERSNGDQPKRYI
LLLGNAGMGKTTLIRRLCLDWSTDCIPQFDFVFLLDSKALSLTDATFSLQTLLLNLSSIA
PSCKDPSAVYAQICAAPKRVLVIFDGFCEVRDYEILLQTQEKDLVTSLQKDSKAQTYTVR
QLYASILQRVLLPGCTLLLSTRTRGTASQILRRTDSLLEVCGFTPTNIQIYLSHYFTDPD
LRTSALDYLKTCSYLHFLCWNPGLCRLVCLVLEQCKSLKVLPRTLTELCHQVLSLKVEED
RKNTHSEAETQSEISEKSVQETKTKSSSSSPMKRRNKNTRTQRARCSKKQGKKDDKDGEE
MKSHGQEAIQTQERELLAQLSSLAWEGIKANISIVPKGRTMSAKLKAFCQRTGLLLSYHL
RTRQVAPSCESEERGEIGTRETGEKRGSKANTETLNADASDDQIVMWANPFLQSYLAGLH
LSLSRTITDRAFLQNLPFQSGQKSRRRPQREEFELTQRFAVGLLFYSRRELQRFHSYTET
TFRDMVAAKQALVTKHLEGLSHDDLSPNQVLEACRYVYEASSSHGDGSRDSDSQRLVAHL
AENLPEVLTFNGVPFKPSDVFAVQNVLDQGGAEGRRFCLNLEDSGIQIAGLRALVGLNNI
NTYRACIADVITLWEQLEQSGEVVLLQVTVSKFKIPHLKATQVCHIEHLAKLVNIHVHKR
LSVSSSQSDSILAEGVPAVKELHKLELELGPEKGPLVLPKLWELLPGLHDLQHLDLENSK
IGDNGAEELTNKLVSLGSLEILNLSENCIGDQGVRKLATVLMDLPKLHCLSLYSNVISDE
GAETLAAVIPHMASLTDLDVKYNKLTSVGAQSLGASLRNCRNIKTLRMWNQCIPYGVFER
LQQQDSRIQWQ
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtttgtagaggtattggacagagtacaagaagccctgactcagtcctctcct
gctcagattcatgctctgctccaacgtttggtcgaggagcagatcatctccgaggcctac
ataaggagcttaggcctgtaccaactttctgacaggatggcgcctgcagcatgtaaacta
aggtctgatctgattagttctcagggatcgacctccgactgcaacctcaaccaaggtcaa
ctcagccaagtgagggaatgtgaccagacaagattagagtttgaaccgtcaggggctgaa
catgactgcacaggacccacgccaaaaatggatccactttctgaacatcaagggtataat
ccaaagtttattcaggaattgggtggggggccagtgatggacaaccactgcctcaaccac
aggctctcttctacatcgataataagtgactataaatgcggtgtaacattagacggtgaa
atgacagaactgcagagaggtgcaaaaatagtgcagaagctattaggtgatagtgaaatg
acaatagatgaggggaatttggaggatgacaaggagtggttagagcaggtagaggaggca
gcgaggcggatcgctgtccctctatggcagcactgggacagaggacagagcatctttctg
cccctgctgactgttattactgctggctgtgcagagagagaaaacacaacaacagaaaga
gaagcacagtgccatgtgttcaatatggaagaggaaacggagcttgcactcgcttgcagg
actttagatttgtacggtgacagctttaactttacagatgcagactcaagattcatgctg
gatacagaaggatccgctggcacggcagaaagtccctattttcctacagacgatggattg
gcgtcaactgacttgaaccagttctttacctctgaaacaggaagaaaagtctcacctgat
ctggatgtctgcagggcagctgacgggtcaacaactgatttgctctgtttaatggaagac
atacaatggggcacggacataggatttacagaagacataacacatttattgtctccctgt
acaccaacagacacttacactgacacacaagaccagtcgttttactccaacacagatcag
agcatgacattaggcatttccaacgatgcagaaaatgttttaaagacttcttgtggtacg
aacacttgcatgactgatggctcaaggagtttgcattggaataaagaggatgaggagggt
gtggatttgcactgcggtgccacaatgcaggaagtggaacaggatccatttttatgtcct
ttcgatctaccagatgatttatctgaaatcttgactgaggacctcttgaggatatttgtg
gagctcgaccccgatcggctgtttgacgatccactgttgaattgtgaagatgaactcatc
acctgcactgatcttcccatgccaatggagctgcccatcctcgacagccagcagcaagga
gaggaggacaaacccacagacaagaccaacaggagaagtaaaagacccagagcttctggg
atacaacagtgccccgatgaggatacaccatccagaccaaagaggcgaagagcagcagct
cgaccaaaacccaaagtggcacagcctgagccagttatcacccaagccacaggatcagag
tcaagttcagcagatacagctggcctctccaccactccaccaacaatcctccatctccat
ccctccattcagtttatcaccatcccagaggctccatcatgtcaagttgttcagacactg
cgactctctccgtcagtaattacatttccaattcccaatactgctgctacgcctacatac
atatttgttcctgccgcatcaccgcaattcaaaccccaagtaccacccctctccccaacg
aatggtgaagtagcgccagtccaaatgagttcatccccacgaggatctctgtcagaaact
gcaagcaaagccataactcatccctgtgcctcacccatctcccccagcaatgagccgtct
acgtgtaaggaatccccttttccagtccttgatattccacaggttgtaaaggactacatt
caggaagtcaaagaatacatgagtcaagcttgcctggttatggaggatggcctcacccta
acctctcattatgtggatgtgcaagtaagccagagggagattctacattctggaaaaaac
acaaacaaagccctcgacaaagagctggtcagcatgggagacacagaccgacaaaaaagc
ttgttggggaggagtcagatctttgaaagatcaaatggagaccaaccaaaacgctatata
ttgcttctgggcaatgctggcatgggaaaaaccaccctgatcagaagactgtgtcttgac
tggtccacagactgcatcccacagtttgactttgttttcttgttagacagcaaggcactc
tctttaacggacgctacatttagccttcagaccctcctactaaacctctcctccattgcc
ccttcctgcaaggacccaagcgcagtgtacgctcaaatctgtgcagccccgaagcgcgtg
cttgtcatttttgatggtttttgcgaggtgcgggactatgaaattcttctccagactcaa
gaaaaagatttagtaacgtcattacagaaggacagtaaagcacagacctacacagtaaga
cagttatacgcttccatccttcagagagtcctccttccaggatgcactcttctgctttct
acccgaacaagaggcacagccagccagattctccgccgaacagacagccttctggaggtg
tgtggcttcacccccactaacatacagatatatctgtcccactacttcactgatcctgac
ctcagaacatctgctttggattacttaaaaacctgcagctatttacatttcctctgctgg
aaccctggactttgtcgcttggtctgcttggttttagaacaatgcaaaagtttgaaggtc
ctaccgagaacgttaaccgagctttgccatcaagtgctttctctgaaagtggaagaagac
agaaagaacacacactcagaggctgaaactcaatcagaaatatcagagaaatcagttcaa
gaaactaagacaaaaagctcaagtagttctccaatgaagaggcgtaataaaaacactcgc
acacaaagagcaaggtgttcaaaaaaacagggaaaaaaagatgacaaagacggagaggaa
atgaagagtcatggccaggaagctattcaaacacaggagagggagctgctggcccagtta
agttcactggcctgggaggggatcaaagcaaacatttccattgtccccaaaggacggacc
atgtctgccaaactcaaggcgttctgccaaagaacagggctcttactctcttatcatctc
aggacgaggcaggttgccccaagttgtgagagtgaggagagaggggaaattggaacaaga
gagactggagaaaagaggggaagcaaggcaaacacggaaactttaaatgcagatgccagt
gatgaccagatcgtgatgtgggccaaccctttccttcagagttaccttgcagggctccat
ttgtctctgtcaaggaccataacagaccgtgccttcctccagaacctccctttccaatct
ggccagaagagtcgtcggcggccccaaagggaggagtttgaactgactcagcggtttgcc
gtcgggctgttgttctacagcaggagagagcttcagaggtttcactcatacacagagaca
accttcagagacatggtggccgctaagcaggctttagtgacaaaacaccttgaaggtctt
tcccatgatgacctgagccccaaccaggtcctggaggcttgtcgctatgtttatgaggcg
agctcatcacatggtgatggtagcagagacagtgatagtcaacgattggttgctcatctg
gcagagaatcttccagaagtcttgacatttaacggagttccttttaagccatcggacgtg
tttgctgtgcagaacgttctcgaccagggtggagctgaaggtagaaggttttgtttgaat
ctggaggattcagggatacagattgcgggactcagagctctggtgggcctcaacaacatc
aacacatacagggcgtgcattgctgatgtcatcaccctatgggagcagctagagcaaagc
ggtgaggtagtgctcctacaagtgacggtgtccaaattcaagatcccccatctgaaggcc
acacaagtgtgtcatatagagcacctggcaaagctggtgaacatacatgtgcataagagg
ctgtcagtcagttccagccaatccgattcaatcttggcagagggggtaccagcagtcaaa
gagctacacaagctagaactggagcttggtccagagaaaggtcccctggttcttcccaag
ctatgggagctccttccaggtctacatgaccttcagcacttagatctagagaacagtaag
atcggggacaatggagcagaggaattaactaataaattagtctcacttggatccctggag
attctcaatttgtcagagaattgcataggagaccagggggtgaggaaactggcaactgtg
ctgatggatctccccaaactgcactgtctaagtctctacagtaatgtgatctctgatgaa
ggggcagagactttggctgctgtcatcccacacatggcttcgctcactgaccttgatgtc
aagtacaacaaactaacaagtgttggagcacagagcctgggagccagtctgaggaactgt
agaaacataaagactttgaggatgtggaaccagtgtattccatacggagtgtttgagaga
cttcagcagcaggacagtcggatccagtggcagtag
DBGET
integrated database retrieval system
