Eleginops maclovinus (Patagonian blennie): 134878589
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Entry
134878589 CDS
T09869
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134878589 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emac03009
]
134878589 (utp18)
Ribosome biogenesis [BR:
emac03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134878589 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NOL10_N
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Cytochrom_D1
Beta-prop_VPS8
SGL
Beta-prop_DCAF4
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
134878589
NCBI-ProteinID:
XP_063760801
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Position
16:complement(24576926..24586741)
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AA seq
515 aa
AA seq
DB search
MEEVIQLPQPRPLKRKQPRPESSDPREEERRRLRNVSRLAVLGGQDQSVKLLEDLLFGGE
EELVEKLEEVDEEPTVVSLHDGDDESGESEDEGRAKPAANREAVWIDEDDKREEQVDMKH
RFRRDLIRGDAEETLSKQRLQQRMREQFQKSMGGAPSWADSSVKKKNADDEEEEELMRRT
GNFVASSERLPGNILRMKKCLHANAARPSPDALTSVQFHPNAQVVMAAGLDQSLSLFQVD
GKSNPQIQSIRLEKFPVHRAAFSQDGETVIATSLRNKMFYLYDMMEGRVTPVTSVRGLTE
ARVKEFSVCPEGGALLLSGTRGYLHLLTLKTREVVSSLKINGEVSGVAFSPDGSKVFANS
AEGEVYVWDLRSSRCVCRFSDEGCVTGTSIAASKDGRYLACGSQSGVVNVYSQEACLRSD
KPRPLKAVMNLLTPVTALTFNPSSEILAMASRSEDEAVRLLHLPSLSVFSNFPVSKRKIV
YRAASLDFSPHSGFFSLANNKGHAPLFRLMHYKDF
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtaatccagctgccgcagccccggcccctgaagaggaagcagccccggccg
gagagctccgaccccagggaggaggagcggcgccggctcaggaacgtgagccggctggcg
gtgctgggggggcaggaccagtcggtgaaactgctggaggatctgctgttcgggggcgag
gaggagctggtggagaaactcgaggaggtggatgaggagccgacggtcgtctcattgcac
gacggagacgatgagtccggagagtcagaggacgaagggcgagcgaagccagcggcaaac
cgagaggcggtgtggatcgacgaggacgacaagcgggaggagcaggtggacatgaagcat
cgattccgcagagacctgatccgaggagacgcagaggagaccctgagcaaacagagactc
cagcagaggatgagagagcaatttcagaagtcaatgggaggagcaccctcgtgggcagac
agcagcgtgaagaagaagaacgctgatgatgaagaggaggaggagctgatgaggaggacg
gggaacttcgtggcgtcttccgagcgtctgcccggcaacatcctgaggatgaagaagtgc
cttcacgccaacgcagcccgcccctcgccggacgctctcacctccgtccagttccacccc
aatgctcaggtcgtcatggccgccggcctggaccaatcactgagcctgttccaggtggat
gggaagtcgaaccctcagatccagagcatccggctggagaagtttccggtccaccgggcg
gcgttcagccaggacggtgagacggtgatcgccacgagtctgaggaacaagatgttctac
ctgtacgacatgatggagggccgagtaacccccgtcacctccgtcaggggtctgacggaa
gcgcgggtgaaggagttctccgtgtgtcctgaaggaggcgctctgctgctgagcgggacc
agaggctacctgcacctcctcactctgaagacccgggaggtcgtgagcagcctgaagatc
aatggggaggtcagcggcgtcgccttctcccccgacggcagcaaggtgttcgccaactca
gcggagggggaggtgtatgtgtgggatctgcgaagctctcgatgtgtgtgcaggttttct
gatgaagggtgtgttacggggacctccatcgccgcctccaaagacggacgctacctggcc
tgcgggtctcagtcgggcgtggtgaacgtgtactctcaggaggcgtgtctccgctcagat
aagccccgccccctgaaggctgtgatgaacctgctgaccccagtcacagcgctgaccttt
aacccctcctcggagatcctcgccatggcatcccgcagcgaggacgaggcggtgcgcctg
ctgcacctcccctccctcagtgtgttctcgaatttcccggtctccaagaggaagatcgtg
taccgtgccgccagcctcgacttctcccctcacagcggcttcttctcattggccaacaac
aaaggacacgctccactcttccggttgatgcattacaaagacttctga
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