Eleginops maclovinus (Patagonian blennie): 134878750
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Entry
134878750 CDS
T09869
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03013
Nucleocytoplasmic transport
emac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134878750 (thoc6)
09122 Translation
03013 Nucleocytoplasmic transport
134878750 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134878750 (thoc6)
03041 Spliceosome [BR:
emac03041
]
134878750 (thoc6)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
134878750 (thoc6)
Spliceosome [BR:
emac03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134878750 (thoc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_2nd
ANAPC4_WD40
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_RIG_2nd
NBCH_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_IP5PC_F
Beta-prop_ACSF4
Beta-prop_NOL10_N
Beta-prop_WDR90_POC16_2nd
WDR54
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_WDR41
Beta-prop_WDR75_1st
Beta-prop_HPS5
WD40_like
Motif
Other DBs
NCBI-GeneID:
134878750
NCBI-ProteinID:
XP_063761030
LinkDB
All DBs
Position
16:complement(4262779..4271449)
Genome browser
AA seq
323 aa
AA seq
DB search
MGPVELLHMSVFSQSFSPCGRFLAAGNSYGEIAVFSLSAALSPDATALSQKPVLTFTAHE
GPVFSLLSTDCHLMSAGNGEISCWSWSDLTKKNVKPLWTKRPNYKSSLEIPEINAMVLNT
RDNSLVVGGGDNNIHILDLEHGIFKTVLQGHSDYVHCLSLREREAEILSGGEDGAVRMWD
SRTGQSVHCVEIYKYESCARPQYGKWISCLTTDSDWMLCGGGPSLSLWHLRSLSPTSIFT
LTGCQRQTSFYQDMILAVGEGPSVAHCLLGGEVKAQIPCTPQSLNTLQLNTNSAEHRMLT
VGGSSNHIDVFTNLSYRAFSLSF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccgtagagctcctccacatgtccgtgttctcgcagagtttttctccctgcgga
cgatttctggcagccgggaacagctatggagagatcgcagtgttcagtttgtctgcagct
ctgagtccagatgccacagccctcagtcagaaacctgttctaaccttcacagctcatgaa
gggcccgtgttctcgctcctctccactgactgccacctcatgagcgcaggaaacggagag
atcagctgctggagctggagcgacctcaccaagaagaatgtgaaacctctgtggacaaag
agaccaaactacaaatccagtctagagataccggagatcaacgctatggtcctaaacacc
cgggataacagtctggtggtgggaggaggagacaacaacatccacatcctggatctggag
cacggcatcttcaagacggtgctgcagggacactcggactacgtccactgtttgagcttg
agagagagggaggcagaaatcctgtctgggggggaggacggagctgtgaggatgtgggac
agcaggacgggtcagtccgtgcactgcgtcgagatctacaagtacgagagttgtgctcgt
cctcagtacggtaaatggatcagctgtctgaccaccgactcagactggatgctgtgtggt
ggaggtccgtctctgtctctgtggcatctccgctctctgtccccgacctccatcttcact
ctgacaggctgccagagacagacgtccttctaccaggatatgatcctggctgtgggggag
ggcccatctgtggctcactgtctccttgggggggaggtcaaagctcagatcccctgtacg
ccacagagcctcaacacgctgcagctcaacaccaacagcgccgagcaccggatgctgacg
gtgggaggcagtagcaatcacatcgatgtgttcaccaacctgtcgtacagagccttctcc
ctcagcttctga
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