Eleginops maclovinus (Patagonian blennie): 134878832
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Entry
134878832 CDS
T09869
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
emac03036
]
134878832 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
emac04812
]
134878832 (nedd1)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
134878832 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
134878832 (nedd1)
Cytoskeleton proteins [BR:
emac04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
134878832 (nedd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_LRRK2
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_VPS8
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
134878832
NCBI-ProteinID:
XP_063761069
LinkDB
All DBs
Position
2:complement(719594..724875)
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AA seq
644 aa
AA seq
DB search
MEEVTRLVSTGDCVRIWDAGSMAPLEQFNPHSSSHPVAQACWSSNNQYLVSASSSGDKLV
VCSLKSSPVPVVELGDGKKQTCVSLSSSSQFLVSGGLDHCVHIWDLKTKRLHRSLRDHKE
EVTCVSFNSNDSYVASGSSSGDLVLHSLTTNLSSKAFGHGNNQPIHDLRLSLLRRSLLGS
VSDSGSVVLWDSNTQKELHAFDGAHKAPGSGLAFSPASELLVVSVGLDKKIVCYDTASKI
VLRSIRVDSPLTAVDFTPDGTGLVVGSTQGKIFQYDLRNSSAPTRVTAAHKTSITCLRFQ
SSSRHKQSSKLGSSKIVKRSSTKLSNSQSDPAPHRQVTGTAGGAAAEVLTREAEGWQGPE
QLPVGEKFSSVGRNSLDVFSPAREDSRFPGTTGDTLFGRTLVTGLEMLSREGEGQPVVSR
ASLDIFSPVREDSHSGIHRKTPLGTPLTAGRCYSPLSVFQTPPPIKEEEPLTAAESCGPG
KSEKASSSSQEGETTPTSSQLTNHSQPVPAFFTPDLRRTNGIQAQLSYESPAQGAPPTAA
GASLSAAASSSLSQNIMEVVGQGAAAPLSSLQIHFIQNMIHETLEDFRDVCHRDIVNLQV
EMVRQFYIQLNEIHGLIEKYSVNESLVEEVEKLREENRRLKTNY
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacccgcctggtgtccacaggagactgcgtgaggatctgggatgccggt
tcgatggctccgctggagcagtttaaccctcacagcagcagccacccggtggctcaggcc
tgctggagctccaacaatcagtacctggtgagtgccagcagcagcggggacaagctggtg
gtctgcagcctcaaatcctccccggtccccgtggtggagctgggagatgggaaaaagcag
acctgtgtgtccctcagctcctcctctcagttcctggtgagcgggggtctggatcactgc
gttcacatctgggacctgaagaccaagagactgcaccgctccctgagggaccataaggag
gaggtgacctgcgtctccttcaactccaacgacagctacgtggcttcgggctccagcagc
ggagacctggtgctgcacagcctcaccaccaacctgtccagcaaggccttcggacacggc
aacaaccagccgatccacgatctgcggctgtcccttctgcggcgctcactgctgggcagc
gtgtcagacagcggctcagtggtgctgtgggactcgaacacgcagaaggagctgcatgcg
ttcgacggcgcccacaaagcccccggctccggcctcgccttctcccccgccagcgagctg
ctggtggtcagcgtgggtctggacaagaagatcgtctgctacgacacggccagcaagata
gtgctgaggtccatccgggtggacagccccctcacagcggtggacttcactccggacggc
accgggctggtggtgggctccacgcaggggaagatcttccagtacgacctgaggaactcc
agcgcccccacccgggtcaccgccgctcacaaaacttccatcacctgcctccgcttccag
agcagcagcagacacaagcagtccagtaagctgggctcctcaaagatcgtgaagagatcc
tccaccaagctgtccaacagccagtctgaccccgccccccacagacaggtgacaggtaca
gcagggggcgctgcagcggaggtcctgacccgggaggctgagggctggcagggtccggag
cagcttcctgtcggggagaagttcagcagcgtgggccggaacagcctggacgtgttctct
ccggctcgggaagactcccgtttccctgggaccaccggagacacgctgttcggtcgaacc
ctcgtcaccggactggagatgctgtcccgggagggggaggggcagccggtggtcagccgt
gccagtctggacatcttctcccccgtcagagaagactctcactccggcattcaccgtaag
actcctctggggacgccgctgaccgccggacgctgctacagcccgctgtccgtcttccaa
acccctccccccatcaaagaggaggagccactcaccgccgccgagtcatgtggccccggc
aagtcggagaaggcaagcagctccagtcaggagggggagaccacgcccacttcctctcag
ctgacgaatcacagccagccagtcccggcattcttcaccccagacctcaggagaaccaac
gggattcaagcgcagctgagctatgagtcacctgcacagggagctccgcccactgcagca
ggagcgtctctctctgccgccgcctcctcctccctctcccagaacatcatggaggttgtc
gggcagggagcagcagctcctctctcctcgctgcagatccacttcatccagaacatgatc
cacgaaactctggaggacttcagggatgtgtgtcacagagacatcgtgaacctgcaggtt
gagatggtgcgacagttttacatccagctgaacgagatccacggcctgatagagaaatac
tccgtgaacgagtctctggtggaggaggtggagaaactgagggaggagaaccgccggctg
aagaccaactactga
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