Eleginops maclovinus (Patagonian blennie): 134879293
Help
Entry
134879293 CDS
T09869
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134879293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134879293
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134879293
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
134879293
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
134879293
NCBI-ProteinID:
XP_063761810
LinkDB
All DBs
Position
17:complement(16737973..16745822)
Genome browser
AA seq
571 aa
AA seq
DB search
MFGANRKKFMEGGIESDYADDSSLYYTQQSMFPPHRPDKDMLTSSSASSTGQLSQLGASL
YGPQSALGFPMRGMNSSAAPQLSRSGLNQPGSQLPSHGSTPNTGTMHTPPSPSRGILPMN
TRSVLNHSQQVGGPTAQSGGMGGVGVERGGGGRSSSMGSPSRSSPSIIGMPKQQQARQPF
TINSMSGFGVNRNPGYNMNNSLSNNIFNGTDGSENVTGLDLSDFPALADRSRRDGGSNPT
PLLNPLAGRAPYVVASLTTLSSMFPVGMVTKPSNEQSQDFSIHNEDFPALPGPNYQSKDP
SSTSEDSKTRSHVLTRPIFSDCFFPPFLSNQNLNSSGKPASNSDGPKFPGDKSSAPSNNN
QQKKGIQVLPDGRVTNIPIGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNL
NSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLSRYGEDLLFYLYY
MNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNAYERGTYYFFDCLNWRK
VAKEFHLEYDKLEERPHVPSTFNYNPAQQAF
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaaccggaagaagtttatggagggagggatagagagcgactacgcggac
gactccagcctctattacacccagcagtccatgttccctcctcaccgccctgacaaagac
atgctgacgtcttcctctgcttcctcaacgggtcaactgtcacagctaggagccagctta
tatggcccgcagagtgctctggggtttcccatgcgtggaatgaacagcagtgcagcgccg
cagttaagtcgaagtggattaaaccaaccaggcagccaactcccgagccacggcagcaca
ccgaacaccggcacgatgcacacacccccctcacccagcagggggattctgccgatgaac
acccggagtgttctgaaccacagccagcaggtcgggggtcccacggcgcagtcgggaggg
atggggggtgtaggtgtggagagggggggaggaggaaggagcagcagcatggggagtccc
agccggtcgtcaccgagcatcatcgggatgcccaaacagcagcaagcacggcagcccttc
accataaacagtatgtcggggtttggtgtgaacaggaatccaggctacaacatgaacaac
tccctatccaacaacatcttcaacggcacagacggcagtgagaatgtgacggggttggat
ctgtcggacttccctgcgttagcggatcggagtcggagggacggaggctcaaatcccaca
ccgctactcaacccgctggctggtcgggctccatacgtcgttgcgtcgctaaccacgcta
tcctccatgtttccagttggcatggtaacgaagccgtccaatgagcagtctcaggatttt
tcgattcacaacgaagatttcccggctctccccgggcccaactaccaatcaaaagacccc
agcagcaccagcgaagacagcaaaacgcgctctcacgtcctgactcgtcccattttttcg
gactgttttttccctccgtttttgtccaatcagaatctgaactcgtcgggaaagcccgcc
tccaactcagacggtccaaagttccctggagacaagagctccgcgcctagcaacaacaac
cagcagaagaaagggattcaggtgcttcctgatgggcgggtgaccaacatcccgatcggc
atggtaacggatcagtttgggatgatcggcctgctgacgttcatccgggcggcagagacc
gaccccggcatggtgcaccttgctctgggctccgacctcacaacgctgggcctcaacctc
aactccccggagaatctttatcctaagttcgcgtctccctgggcgtcggctccgtgtcga
ccgcaggacatagacttccacgtcccctcagagtatttaaccaacatccacataagggac
aagttagcagctatcaagttgtcgcggtatggagaagatctgctgttttacctctactac
atgaacggaggagacctactacaactcctggctgcagtagaactgtttaacagggactgg
cggtaccataaagaggagcgggtttggatcactcgggccccggggatggagcccacgctg
aagaccaacgcctacgagagagggacctactacttcttcgactgcctcaactggaggaag
gtggccaaggagtttcatctggagtatgacaaactagaagagcggcctcacgttccctcc
acattcaactacaatcccgcccagcaggccttctga
DBGET
integrated database retrieval system
