Eleginops maclovinus (Patagonian blennie): 134879309
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Entry
134879309 CDS
T09869
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emac04121
]
134879309 (pdzrn4)
Enzymes [BR:
emac01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134879309 (pdzrn4)
Ubiquitin system [BR:
emac04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
134879309 (pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
GRASP55_65
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
134879309
NCBI-ProteinID:
XP_063761829
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All DBs
Position
17:13489165..13520439
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AA seq
819 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGRNFSKVEHEEAVVEAIRRDPIVVQVLRHTPTRAT
AAVGHNHNCMQQDVCVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHT
MEHEFYECPEYLSNIPAEVERTEDYEYEEVELCRQNSQEKLGLTLCYRTDDEEDSGIYVS
QVEPNSIAARDGRIKEGDRILQINGFEVQDREKAVALLSSEEARSITLLVTRPEIQLEEE
VWLDDEQQELVEELKKEILEERRKQKERNFDRGDENLAEEDMTTDTATYSSTNQDSGFGR
STDSPEHQPLLAGLNRRSPAHCLRERWRADHPHAKQGIGVQQETKGPRTRSKSHSQEGGI
NNRNSGGGILGLENRFQQLLELKCQIRNGGECGVYSIRHSIECSVTEQGVEGDGEDRVRG
GGNGVEQELRMLNEELCSIELECQSIMQAHQLRQNQLNLSQPASCSPGRSPKEGHKRHGR
LADIHEHPERSDNDRIREKDSSSAYNTAESARSTPLGMERSPDHSLQRHISFTNQKNLRL
ASSTPSRPIAIQKPQGTPSHNRPSDPGTVISSSPDQSNPSRSESDPALPADDERCEKKRR
TRESRRGLPYGSYQTTPHPGQGGSRQLQSYMQLLQQHSSLEYSQSQLSLLSVCRDPVHRS
GRPGEPRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMKMG
RYWSKEERKQHLARAREQRKRREFMQKSRLDCLKEGPASGAEGRKEINILELSHKKMLKK
RNKKILDNWMTIQELMSHGARVPEDSKVHHSAFLSVTTV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgggaggaacactacaaactgctgtatgag
attgcacaggtgaacgggcgcaacttctccaaggtggaacatgaggaggcagtggtggag
gccatcaggcgagaccccatcgttgtccaggttctccggcatacacccacaagagccacg
gccgctgtcggacacaaccacaactgcatgcagcaggatgtgtgtgtggtggatgtatgc
acgcaaacggacatcaccttcgagcacattatggcgctggcgaagctacggcctgcgact
ccgcccgttcctgacatctgtcctttccttttgtccgacagttgtcactccatccacacc
atggagcatgagttttatgaatgtccagagtacctgtccaatatcccagcagaggtggag
aggactgaagattatgagtatgaggaagtggagctgtgcaggcagaacagccaggagaag
ctcggcttgacgctgtgctacaggaccgacgatgaggaggacagcggcatctatgtcagc
caggtggagccaaacagcatagcagcgagggatgggcgcatcaaggaaggagatcgtatt
ctacagataaatggctttgaagtgcaagacagagagaaagctgttgccttgttatcaagt
gaagaagcaagaagcatcacactcctggtgacaagaccagaaatccagctcgaggaggag
gtatggctggatgacgagcagcaggagctcgtggaggagctgaagaaagagatcctggag
gagaggaggaagcagaaggagcgcaactttgacaggggagatgagaatctagctgaagaa
gacatgacaacagacacagctacatattcctccacgaatcaagacagtgggtttggacgc
agtacagacagtccagagcaccaacccctcctggctggactcaacaggaggtctccagct
cattgcctgagagagcgatggcgggcagatcacccacacgcaaaacaagggattggtgtt
cagcaggaaactaaaggtccaaggacaaggtccaaaagtcacagccaggaagggggaatc
aataatcgtaatagtggaggcgggatacttggtttagaaaatcgcttccagcaactccta
gagctcaagtgtcaaatccgcaatggaggcgagtgtggggtgtactccattcgacacagt
atagagtgtagtgtcactgagcaaggggtggagggagatggcgaagatcgggttagagga
ggagggaatggagtggagcaggagttgaggatgctgaatgaggaactgtgcagcattgag
cttgaatgccagagcatcatgcaagcgcaccaactccgtcaaaaccagctaaatctctca
cagccagcgtcctgctcaccgggacggagcccgaaggagggacacaagcggcacggcagg
ttggccgacatccacgaacacccagaacggtcggacaatgacaggatccgagagaaggac
agctccagtgcctacaacacagctgagagtgctcggtcgacacccctgggtatggagaga
tctcctgatcattcactgcagagacacatcagcttcacaaaccagaaaaacctcagactg
gcttcctccacgccctcccgccccattgcgatccaaaagccacaaggtacaccgagtcat
aacagaccatcagatccaggcactgttatctccagcagcccggaccagagcaacccttcc
cgatccgagtcagaccctgccctaccagcagatgatgagaggtgtgaaaagaaaagaagg
acaagagagtccaggagggggcttccctatggttcttatcagacaaccccacatccaggc
cagggaggatccaggcagctgcagagctacatgcagctgctacaacagcactcgtccctg
gagtattcccagagccagttgagtctgctcagtgtctgtcgagatcccgtgcaccggagc
ggacgccctggggaaccccgtctcgaatggaaggtcaaggttcgagctgacggcacacgc
tacgtggcgcggaggcctgctcgcgaccgcatcctgagggagcgtgcgctaaggataaga
gaggagaggagcggaggcatgaccacggatgacgatgccatgagcgagatgaagatgggc
cgctactggagcaaagaggagaggaagcagcacttggcgcgtgccagggagcaaaggaag
aggagggagttcatgcaaaagagccgcctcgattgtctgaaggaggggccagccagtgga
gctgagggcaggaaggaaatcaatatcttggagctcagtcacaaaaagatgctgaagaaa
cggaacaaaaagatcctggataactggatgaccatccaggagctcatgagtcatggggct
agagtcccagaggactccaaagtgcaccacagtgcattcctttctgtcacaacggtctag
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