Eleginops maclovinus (Patagonian blennie): 134879906
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Entry
134879906 CDS
T09869
Symbol
supt5h
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134879906 (supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emac03021
]
134879906 (supt5h)
03019 Messenger RNA biogenesis [BR:
emac03019
]
134879906 (supt5h)
Transcription machinery [BR:
emac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
134879906 (supt5h)
RNA polymerase I system
134879906 (supt5h)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
134879906 (supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
DUF150_C
Ribonuc_P_40
Arabino_trans_N
Motif
Other DBs
NCBI-GeneID:
134879906
NCBI-ProteinID:
XP_063762539
LinkDB
All DBs
Position
18:1525873..1548277
Genome browser
AA seq
1093 aa
AA seq
DB search
MSDSDDSDFSDNQSERSSDGEAEEVENEEETGSPVGSDKVAEEEGEDLDEEEYDEEEEED
DDDRPRKKPRHGGFILDEADVDDEYEDEEDHWEEGAEDILEKEEAEVSNIDHVVLDEDNS
GSRRLQNLWRDSREEALGEYYMKKYANSSGGEHFSGGSEELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATVIALMRKFIAYQFTDTPLQIKSVVAPDHVKGYIYVESYKQTHVKSAIE
GIGNLRMGLWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVEPSQ
NTISLKMIPRIDLDRIKAKMSLKDWFAKRKKFKRPAQRLFDAEKIRSLGGEVSHDGDFMI
FEANRYSRKGFLFKSFAMSAVITDGVKPTLSELEKFEDQPDGIDLEVVTESGKEREHNLQ
AGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVKVI
AGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGELVQ
LDPQTVGVIVRLERETFQVLNMHGKVMTVRHQAVNRRKDNRFAVALDSEQNNIHVKDIVK
VIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGG
FAPMSPRISSPMHHGGGSSPQRGGGGGGGGGGGGGGGGGGGMGRGRGRRDNDLIGQTVRI
SQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTMGAKRHSGMTSTHGRTPMYG
SQTPMYGTGSRTPMYGSQTPLHEAGSRTPHYGSQTPLHDGSRTPGQSGAWDPSNPNTPSR
NDEEYDFGYDDEPSPSPQGYSGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYS
PYAAPSPQGSYQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYS
PMTPGAPSPGGYNPHTPGSNIEQGGSDWVTPDILVKVKDSFMDLMGQSGVIRSVTGGMCS
VFMQESEKVVSISSDHLEPITPTKNNKVKVILGEDREATGILLSIDGDDGIVRMELDDQL
KILNLRFLGRLEH
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcgacgacagcgacttctccgacaaccagagtgagcgcagcagcgacgga
gaggcggaggaggtggagaatgaggaggagacgggcagtcccgtgggcagcgacaaggta
gcagaggaggaaggagaggacctggacgaggaggaatatgatgaagaggaggaggaggac
gatgatgaccgcccgaggaagaagccgaggcacggaggcttcattctggatgaagccgat
gtggacgatgagtatgaggacgaggaggatcattgggaggaaggagctgaggatattctg
gagaaagaggaggctgaagtgtctaacatcgaccatgtggtgctggatgaggataactcc
ggatccaggaggctgcagaacctgtggagagactccagagaggaggcgctgggtgaatac
tacatgaagaaatacgccaactcctcaggaggagagcatttctctggagggtcggaggag
ctctctgatgacatcactcaacagcaactacttcctggagtcaaggatcccaatctgtgg
acggtcaagtgcaagattggagaggagagggcgacggtgatcgctctcatgaggaagttc
atcgcctaccagttcaccgacacgccgctgcagatcaagtccgtcgtggcaccggatcac
gtcaaaggctacatctacgtggagtcgtacaagcagacgcacgtgaagtcggccatcgag
ggcatcgggaacctgcggatggggctgtggaaccagcagatggtgcccatcaaggagatg
accgacgtcctgaaggtcgtcaaggaggtcaccaacctcaagcccaagtcctgggtccgg
ctcaagagaggcctgtacaaggacgacatcgctcaggtggactacgtggagccgagtcag
aacaccatctccctgaagatgatcccccgcatagacctggaccgcatcaaggccaagatg
agcctgaaagactggttcgccaagaggaagaagtttaagagacctgctcagaggctgttt
gatgctgagaagatcaggtccctcgggggggaggtgagccatgacggagacttcatgatc
ttcgaggcgaaccggtacagccgcaaaggattcctgttcaagagcttcgccatgtctgcc
gtgatcacagacggagtgaagcccaccctgtcagagctggaaaagtttgaggatcaaccg
gacggcatcgacctagaggtggtcacagagtcaggtaaggagcgtgaacacaacctgcaa
gccggggacaacgtggaggtgtgtgagggggagctgatcaacctgcaggggaaaatcctc
agcgtggacggcaacaagatcaccatcatgcccaaacatgaagacctgaaggaccccctg
gagttcccggctcacgagttgaggaagtacttccggatgggcgaccacgtgaaggtgatc
gccgggcggtacgagggcgacaccggcctcatcgtcagggtggaggaaaacttcgtcatc
ctcttctctgacctcaccatgcacgagttgaaggtgttacccagagacctgcagctctgc
tcggagacggcgtccggcgtggatgcgggggggcagcacgagtggggagagctggtgcaa
ctggaccctcagacggtcggggtcatcgtccggctggagagggagacgttccaggtgctg
aacatgcacgggaaggtgatgacggtgcggcatcaggcggtgaaccgcaggaaggacaac
cgcttcgccgtggcgctggactctgagcagaacaacatccacgtcaaggacatcgtcaag
gtcatcgacggcccgcactcgggtcgtgagggggagatccgtcacctgttccgaggcttc
gctttcctccactgtaagaagctggtggagaacggaggcatgttcgtctgcaagaccaga
cacctggtgctggccggagggtcaaagcccagagacgtgaccaacttcacggtgggagga
ttcgctcccatgagccctcgcatcagcagccccatgcaccacgggggaggaagttctcca
cagagaggaggaggtggaggtgggggaggaggaggaggaggaggaggagggggaggagga
ggaatggggcggggccgaggacgaagagacaacgatctgattggtcaaaccgtccgcatc
tcacagggtccttacaaaggatacatcggtgtggtgaaggacgccacggagtcgacggcg
cgcgtggagctgcactccacctgtcagaccatctcagtggaccgacagcgcctcaccacc
atgggggctaagaggcacagcgggatgacctccacccacggacgcacgccgatgtacgga
tcccagactccgatgtacgggacgggctccaggacgccaatgtacggctctcagacgccg
ctgcatgaagcgggaagccgtacgcctcactacggctctcagaccccgctgcatgatggg
agcaggacgccgggtcagagcggagcctgggaccccagcaaccccaacacaccctccagg
aacgacgaggagtacgacttcggctacgacgacgagccctccccgtcccctcagggctac
agcgggacccccaacccccagactcccggttacccagaagtcccctctccacaggtcaac
ccccagtacaacccccagacgccgggcacgcctgctatgtacaacacggagcagtactct
ccgtacgccgccccctcccctcagggctcctaccagcccagccccagccctcagagctac
caccaggtggcgccttctccggtgggctaccagaacacgcactcccccgccagctaccac
cccaccccgtcccccatggcataccaggccagtcccagccccagtccggtgggctacagc
cccatgactcccggagccccgtcaccaggaggatacaacccccacacccccggctccaac
atcgagcagggcggcagcgactgggtcacccccgacatcctggtgaaggtcaaggactcc
ttcatggacctgatgggccagagtggggtgatccgcagcgtcacgggcgggatgtgctca
gtgtttatgcaggagtcggagaaggtggtcagcatcagcagcgatcacctggagcccatc
acccccaccaagaacaacaaggtgaaggtgatcctgggcgaggaccgcgaggcgacgggc
atcctgctcagtatcgacggagacgacggcatcgtgcgcatggagctggacgaccagcta
aagatcctcaacctgcgcttcctcggacgcctggagcactga
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