Eleginops maclovinus (Patagonian blennie): 134880133
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Entry
134880133 CDS
T09869
Symbol
nup88
Name
(RefSeq) nucleoporin 88
KO
K14318
nuclear pore complex protein Nup88
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134880133 (nup88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134880133 (nup88)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134880133 (nup88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
HTH_32
PqqD
HAUS-augmin3
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
134880133
NCBI-ProteinID:
XP_063762933
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All DBs
Position
18:20747255..20749834
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AA seq
717 aa
AA seq
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MAAFCAERWLNELPNHAIFQKIRGKLDSDPYSNERGIAKNLTFCLGGDLFVWDDIDRVFY
TTNLRQLNTDEGRGSGNHQTLLCINPPLFDLCQVLLSPTQHHVALIGQRGVSVLELPQRW
GKRSEFEGGRSEVNCKTIPVAERFFTSSASVSLRQAAWYPSEADEPHLVLLTSDNAIRFY
GLKSPQTPSKVLSVSQSEDDSSSHRPVRSYAASLGEIAVAFDFGQISSPLRRTHGSKDQL
VYPLYILYENGETYVSYTSQANGLSLTKPAGPLPMYPAAEDNYGYDACAILCLPCVPSIL
VIATETGTLYHCVVLESEEEEEARTVEKWIRGPDAVPALYVFECVELELTLKVATAEDEE
PQELDFTCPIRLHRDPLCQHRYHCTHEAGVHSVGLIWVNKLQNFLRSGEEDKDSLQELAA
EKRCIVEHILCTRPLQTSQSSPVLGFLIVSDLSLGATMIVITSTYECILLPLLSSIRPPS
PPLLCSHPGPGSGSSPLRGLANDSFEQHIRNILARSSTNPLVLKAGDKDTSPPPPECLQL
LSRATQVFREEYILKQDMAREELQRRAKLLTSQKNKQLDEMTLCREERKSLREAAERLAD
KYEDAKYRQETIMNRVKKVLGSLQSQLPILSNSEKEMKKELRTISDQLKHLDNCIKQVNM
KMEYQKRQVDKDVPVDRATVSLNAQQKKVVQDVLREQGQQIGDMMKQMKDIKSHFSF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcggcattctgcgctgaacggtggttgaacgagttaccaaaccatgctattttccaa
aaaatacgagggaagttggattcagatccttactcaaatgaaagagggatagctaaaaat
ctgacattttgtttgggtggggacttgttcgtgtgggacgacatagaccgcgtgttttac
accaccaacttgcgacagctgaacacggatgagggtcgcggtagcgggaaccaccagacc
ctgctgtgcatcaaccctcctctcttcgacctgtgccaggtgctgctcagtccaacccag
caccatgtggcgctcatcggacagcgaggggtgtcggtgctggagctccctcagcggtgg
ggcaagaggtccgagtttgaggggggacggagcgaagtcaactgcaagaccatcccggtg
gcggagcgtttctttaccagctccgcgtcggtgagtctgcggcaggcggcctggtacccc
agcgaggccgacgagccacacctggtgctgctcacatccgacaacgccataaggttttac
ggcttgaagtcgccccagacaccgagcaaagtactttcagtgtcacagtctgaagatgac
agttccagccaccgcccagtccgctcctatgcagcttctctcggcgagatagcggtggcg
tttgacttcggacagatttcctctccccttcggcgtacacatggctccaaagaccaactg
gtctaccctctgtacatcctctacgaaaatggggagacctatgtgagctacacgagccag
gcaaatggtttgagtctaactaaacccgctggaccgctccccatgtaccccgcagcagag
gataactacggctatgatgcttgtgccatcctctgcctgccatgtgtgcccagcatcctg
gtcatcgccacagaaacgggcacgctgtatcactgtgtggtgctggagtctgaggaagag
gaggaagcaaggacggtggagaagtggatccgaggcccagatgctgtccccgctctgtac
gtgtttgagtgtgttgagctggagctcactctcaaagtagccacagcagaggacgaggag
cctcaggagctggatttcacctgccctatcagactgcacagagaccccctatgccagcac
aggtaccactgcacccatgaagcaggagtgcacagtgttgggttaatctgggtcaacaag
ctgcagaatttcctccgatctggcgaggaagataaggacagtctgcaggagctggcagct
gagaagcgctgcatcgtggagcacattctttgtaccagacccctccaaaccagtcagtcg
tctccagttcttggctttttgattgtgtccgacctctccttgggcgccaccatgatcgtc
atcaccagcacctacgagtgcatcctgttgcccctgctgagttccattcgccccccctcc
cctcccctgctctgttcacatccaggcccaggctccggtagctcccctctgcgtgggctg
gccaacgactccttcgagcagcacatccgcaacatcttggcacgcagctctaccaatccc
cttgttctcaaggctggggacaaggacacatcaccgccgcctccagagtgcctgcagctc
ctcagcagggccacacaggtgttccgcgaggagtacattctcaagcaggacatggcccgc
gaagagctgcagaggagagcaaaactcctgacaagccagaagaacaagcagctggatgag
atgactctgtgcagggaggagaggaagagtctaagggaggcggcggagaggttggctgac
aagtacgaggacgccaagtatcgacaggaaaccatcatgaacagggttaaaaaagtgctg
ggcagcctgcaaagccagctgcccatactgtcaaacagcgagaaggagatgaagaaggag
ctgaggaccatcagcgatcaactgaagcacctggacaactgcatcaaacaggtgaacatg
aagatggagtaccagaagagacaggtggacaaagacgtgccggtggacagggcgacggtc
tcgctcaacgcccagcagaagaaggtggttcaggacgtcctcagagaacagggacagcaa
atcggtgacatgatgaaacaaatgaaagacatcaaaagccatttcagtttctaa
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