Eleginops maclovinus (Patagonian blennie): 134880234
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Entry
134880234 CDS
T09869
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134880234 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134880234 (dhx36)
03012 Translation factors [BR:
emac03012
]
134880234 (dhx36)
Enzymes [BR:
emac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134880234 (dhx36)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134880234 (dhx36)
Translation factors [BR:
emac03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
134880234 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
HerA_C
NPHP3_N
PhoH
Motif
Other DBs
NCBI-GeneID:
134880234
NCBI-ProteinID:
XP_063763090
LinkDB
All DBs
Position
18:complement(15011031..15032811)
Genome browser
AA seq
1069 aa
AA seq
DB search
MSYGYGGGGGGGGGGGGRRGRRGGRGYRDGSRERWDRGGGRGSGGHCSDFDQDPGEQGGQ
RDRPPPHLKGREIGMWYARYGAVRRKQNDRRSRAVVEMDSAREQHITKLLNSVQNDQPGP
ARDSRDTRASTSDSWRTAANSSGHCYFDGDVSEEEKKKIQFKSEEEEEEVTHKSQRYFPP
AVDKDETPDAWDKDDQQEKEEKESLKKKDKDLEFLFQEVVRDSSLDERLKRDLQRKKSDP
KYKEMLKFRERLPSYNKKEELVQLINSNRVLVVSGETGCGKTTQVTQFILDDYINRGVGS
MCRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSVLYCTTGII
LQWLRSDTLLSSISHLVLDEIHERNLQSDVLLVIVKELLNLRDDLKIILMSATLNAEKFS
KYFDNCPIIHIPGLTFPVEEFLLEDIVEMTGYRPKNPDRRPSWKRGFMQGRQSRPEKEEK
EAEYKESWPCYARTLQGRYSDNTIEALETLDTDDKIDLELILALIRHIVLKEEEGAILVF
LPGWDNISTLNDLLTAQQMFRSDRFVIIPLHSLMPTVNQTLVFKRPPPGVRKIVIATNIA
ETSITIDDVVYVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVCPGKCYHL
YNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGSIARFLEKALDPPTEEAVNLAIKNL
IDLNALDQSENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVFTIAASLSFKDPFFIP
LGKEKMADMRRRVLSKNSKSDHLTIVNAFQGWEEAKQRGARCEREYCWDNFLSANTLQML
HNMKGQFADHLMNTGFVSSRDPKDPKSNVNSDNEKLIKAVIVAGLYPKVAMIRPSHSKKR
PGVKVYTHADGKVCIHPKSVNAEETEFNYKWLIYHLKMRTSSIFLYDCTEVSPFSLLFFG
GDITIQKDEDQETIAVDKWIVFSSPARIAHLVKSLKKELDSLLEEKIRNPAPVDWQNRQS
KDCAVITAIIDLITTQEKPTGSTKGYSRTWAPAPRGQHTHFNDDDVDDD
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggatatggtggtggtggtggtggaggtggaggtggaggtgggagaagaggt
agaagaggaggtcgagggtacagagatggaagcagagagagatgggacagaggaggcgga
cggggctcaggaggacactgctccgactttgaccaggacccaggagaacaaggaggacaa
cgggaccgtcctcctccacacctgaagggacgggagatcggtatgtggtacgcaagatac
ggagccgtaaggagaaagcagaatgaccggagatcgcgggcggtggtcgagatggattcg
gccagagagcagcacattaccaagctgcttaactcggtccaaaatgatcagcctggtcct
gcaagagacagcagggatacaagagcctctacatctgacagctggcggacagctgccaat
agcagtggacattgttactttgatggtgatgtgtctgaagaggaaaaaaagaagattcag
ttcaaatctgaagaagaggaagaggaagtaactcataaatctcaacgttatttccctcca
gcagttgataaagatgagaccccagatgcgtgggataaagacgaccagcaggagaaagag
gaaaaagaaagtctgaaaaagaaagacaaggacctggagttcttatttcaagaagtagtg
agggacagttcactggatgaacgcttaaagagagatctgcagagaaagaaatcagatcca
aagtacaaagaaatgctgaaattcagggaaagactaccatcctataataaaaaagaggag
cttgtgcaactgatcaactccaacagggtcctggtggtgagcggggaaacggggtgtgga
aagaccactcaggtcacccagttcatcctggatgactacatcaacagaggcgtgggctca
atgtgtcgtgtggtctgcacgcagcctcgtcgtatcagtgccatctcggtagcagagcgt
gtagcagcagagagggcagaaagtgtagggaatggaaattcatgtggttaccaaatccgc
ctgcaaagccggttaccacggagacagggttcggtcctgtactgtacaacaggaattatt
cttcagtggcttcgctcagacacactgttgtctagtatcagccacctggttttggacgaa
atccacgagaggaacctgcagtctgatgttttgctcgtcatagtcaaggagcttcttaac
cttcgagatgacctcaagatcatcctcatgagtgccacgctcaatgcggagaagttttca
aagtattttgacaactgtccaatcatccacatccctggtttgacgttcccagtggaagag
ttcttactggaggacattgtggagatgacggggtatcgccctaagaatccagaccgccgt
ccctcatggaagagaggctttatgcagggccgccagtccagacctgagaaggaggagaaa
gaggctgagtacaaggagagctggccttgttatgcgcgcactctgcagggcagatactcc
gacaacaccattgaggcactagagacactggacactgatgacaagattgaccttgagctg
atcttggcactgattcgccacattgtgctcaaagaggaggaaggagcaatcttggtcttc
ctgcctggctgggacaacatcagcactctcaatgacctgctcacggctcagcagatgttc
cgatcagatcggttcgttatcattcctctgcactccctcatgcctactgttaatcagacg
ctggtgtttaaaaggcctcctcctggagttagaaagattgtgattgctaccaatatagcc
gagaccagcatcaccatagatgacgttgtttatgtgatagatgggggtaagattaaggag
accaactttgacaccaacaacaacatcagcactatgactgcagagtgggttagcctggcc
aatgccaaacagaggaaaggacgtgccggcagagtgtgtccggggaagtgctatcatcta
tacaatggtctcagagccagcctgctggatgcctatcaattacctgaaatcatgaggaca
cccctggaggagctctgcctgcagatcaagattttgaagcttggttctatagctcgattc
ctagagaaagccttggaccccccaactgaagaggctgttaacctagccatcaagaacctc
atagacctgaacgccctggatcagtcagagaatctgacagcactgggtttccacctggct
cgtctgcctgtggagcctcacattggcaaactcatcctctttggagccctgttgggctgc
ctggaccccgtattcaccatcgctgcttcactcagcttcaaagaccctttcttcataccc
ctgggtaaagagaagatggcagatatgaggagaagggtcctgtccaaaaactccaagagt
gaccatctcactattgtcaacgcctttcagggctgggaggaagctaaacagcgtggtgcc
aggtgtgagagggagtactgctgggacaacttcctctccgccaatacactccagatgctg
cacaacatgaagggtcagtttgcagaccatctaatgaatacaggcttcgtcagcagcagg
gatccgaaagatcccaaatccaatgtcaactcagacaatgagaagttaatcaaggcagtg
attgtagctggtctgtacccgaaggtggccatgatcagaccatctcacagcaaaaagagg
ccgggggttaaggtgtacacccatgctgatggaaaggtgtgcatccacccaaaatcagtc
aatgctgaagagacggagttcaactataaatggctcatctaccacctgaagatgagaacg
agcagtatcttcctgtacgattgcactgaggtgtccccattctcactgctgttcttcgga
ggagacatcacaatccagaaggacgaggaccaggagaccatcgctgtggacaagtggatc
gtcttcagctccccggcacgcatcgctcaccttgtcaagagtttgaagaaagagttggat
tctttgctggaagagaaaatccgtaaccctgctcctgttgactggcaaaaccgtcagtcc
aaagactgtgctgtcatcacagccatcatagacctcatcaccacccaggaaaagcctaca
ggcagcactaaaggctacagcagaacatgggcgcctgctccgagaggacaacacactcac
ttcaatgacgacgatgttgacgatgattag
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