Eleginops maclovinus (Patagonian blennie): 134880605
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Entry
134880605 CDS
T09869
Symbol
col4a4
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04510
Focal adhesion
emac04512
ECM-receptor interaction
emac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134880605 (col4a4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134880605 (col4a4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134880605 (col4a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emac04147
]
134880605 (col4a4)
00536 Glycosaminoglycan binding proteins [BR:
emac00536
]
134880605 (col4a4)
Exosome [BR:
emac04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
134880605 (col4a4)
Glycosaminoglycan binding proteins [BR:
emac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134880605 (col4a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
134880605
NCBI-ProteinID:
XP_063763669
LinkDB
All DBs
Position
18:complement(720909..758327)
Genome browser
AA seq
1670 aa
AA seq
DB search
MLLTSCSIPSIYTWLWWFLLILMVPPAALGGDQTEPCGGRDCSTCQCFPAKGAMGPPGPL
GQQGPQGPPGFPGPQGPPGEKGHRGDEGQIGAAGLKGDSGSVGVPGFPGLEGVPGHPGPA
GGPGFPGLDGCNGTRGERGDPGISGEQGPYGEPGFYGLKGFPGDPTLYFIQYPGIPGDVG
PSGLTGLPGEPGLGGLTGVMGPAGPDGTNGLPGLPGYRGSPGEKGRSLPGQKGDEGDQGL
QGPPGPFEYVDPPEDLYIKGEKGDPGPKGLCGVQGLPGLDALPGIKGEKGIVGFPGVRGF
YGNPGLPGESGFKGMQGIPGLPGLIGREGPKGITGDPGPKGLPQEKQLTHTGAIGDPGVP
GPRGPPGDIGFMGMHGPVGAPGRSIPGPRGVVGESSVPGSRGDRGEPGLVSKDEPTPGEP
GKPGRPGPQGLKGQEGRPGNNCIPGNPGESGDPGDQGPPGSQGFQGLKGSSGDCDCGPPV
VLKGLPGPKGEQGTPGFPGSTGAPGPRGEKGLLGDTGVRGEQGLRGFPGVVGFKGQKGSF
LVLDFKGEKGNRGQQGLPGTQGFSGRRGLEGLRGGPGVPGPQGESFPSSPGERGPTGYPG
PKGFPGPSGPPGRGVIGAVGKRGAPGDSGPEGIPGPPGLKGVRGDTLPCVPRNPGAPGEK
GDTGNAGNLGVLGSPGFRGITGPDGAKGDKGQFGLPGRPGRQGPPGVVGDPGDEGREGFS
YDGDPGSPGRPGSAGLRGPAGDSAVGPSGPIGFPGPPGAQGPKGVPGPPGNDGLPGILGL
AGGPGVKGQRGQDGAPGILGPKGPTSNLCEAGKPGPMGLFGPQGTIGPPGCVGEKGVVGE
MGPPGVGPQGPKEKPGSPGFPGQPGPQGPSGLSGDPGLPGPGGEKGPMGPQGQDGELGAP
GQTGAFGAPGRKGEGGLNGEDGGLGCEGPKGEKGCKGFPGPEGDTYGVPIKGQPGEDGPP
CSPGFPGPRGNKGLRGANGNPGCPGMNGPPGIVGIPGPPGPYGPPGPPGSPGRTGPPGYI
GFPGETGDEGDLGCPGKDGEPGHQGCTGSKGDPGDSVGVFGPPGDKGPPGDFGTPGAPGP
RGDPGRPGFLGRPGERGCKGDPGQSGDLGPPGVVGPSGPRGRPGFPGLPSKAGADGPPGP
QGCPGLQGPPGPLGLHGLDGLKGVKGDMGTRGLGVPGPPGSKGLPGDKGPLGPPGPYGSS
QPGPPGPRGPPGAQGPPGGLGPKGKSGSDCKAXDPGPRGDPGCAGTDGEPGCAGEIGAPG
DNTPVPGDDGENGDTGCPGTKGQKGSQGPQGQPGLSGNPGAKGIRGSSGPMGLPGSRGPR
GFTGPGGFTGPNGFTGPVGPKGEKGRVSPCPAYPPATQGPPGDPRPPGTPGDVGLQGEIG
QTGPKGRKGDLGPEGPTGPDGPLGPDGDRGELGQQGKRGLVGAKGDPGPIGDRGPSGPSK
NLNSGFMLVMHSQSRLIPTCPPSMRVLWVGYSLLYLEGQEKAHTQDLGQAGSCMRVFSTM
PFSSCNMGKCSYASRNDKSYWLSTTAAVPSIPVGGASIEEHISRCVVCEAPSSPVALHSQ
TSTQPDCPPQWRSLWTGYSFLMHTGAGDEGGGQSLTSSGSCLMDFRAQPFVECQGPRGTC
HYFANIYSFWLTRVEAASSFTSASDSPSTTLKESWQQRESIGRCNVCMRE
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgacttcctgctccatcccctccatctacacctggctctggtggttccttctg
atcctgatggttcctcctgcagctctcgggggcgaccagacggagccctgcggcggacgg
gattgctccacctgtcagtgttttcccgccaaaggagcgatggggcctccaggtcctctg
ggacagcagggccctcaggggccccccggcttcccgggtccccaggggcctccaggagag
aagggccacagaggagacgagggccagatcggagccgccggactgaagggagactcggga
agtgttggcgttcccggttttccaggtttagaaggagtcccgggtcacccgggtccggct
ggaggtccaggttttccaggtctggacggatgtaacggaaccagaggagagagaggagat
cctggaatttctggagaacaaggaccttatggagaaccgggtttttatggactgaaagga
tttccaggagatccaaccctctacttcatacagtatccaggaatacctggcgacgtcggg
cccagtggactaactggtttgccgggagagccaggcctggggggtctgacgggagttatg
ggtcccgcaggaccggacgggaccaacggtctccctggtctgcccggctacaggggttca
cctggagaaaaaggtcgatctctgccgggacagaaaggagacgagggggaccagggcctc
caggggcccccggggccgtttgagtacgtcgaccctccagaagacctgtacattaaagga
gaaaagggggatccagggcctaaagggctctgtggagttcaaggactgccgggtttggat
gcacttccagggatcaaaggagagaaggggattgtgggatttcctggagtcaggggattt
tatggtaaccctggtttgcccggagaaagcggcttcaaggggatgcagggaatcccaggg
ctcccaggtctgattggacgggaaggtcctaagggcataacgggagatcccggtcctaaa
ggcctccctcaggaaaaacaactcacacacacaggtgccattggagaccccggtgtcccc
ggacccaggggccctccaggagacatagggtttatggggatgcacggccccgttggagcc
cctggcagatccatacctggtccgaggggtgttgtgggtgagagtagtgttccaggatcc
agaggggaccgaggagaaccgggtctggtttctaaagacgaacccacaccgggagaacct
ggaaaaccaggaaggcccggaccacaaggactgaaaggacaagaggggagaccaggtaat
aattgtattccggggaacccaggagagtctggagatcctggtgatcaggggccaccgggg
tcccagggcttccaaggtcttaaaggtagctctggagactgtgattgtggcccccccgtt
gtcctgaagggcctccctggccctaagggtgaacaggggactccgggatttccaggatcc
acaggggccccagggccgagaggagagaaaggtttacttggagacacaggagtacgcgga
gaacagggtttgcggggatttcctggtgtcgtagggttcaaaggtcagaagggatcgttc
cttgtgttagattttaaaggtgagaaaggaaaccgggggcagcagggccttccaggcaca
caaggattctcagggagaaggggcctcgaaggactccgggggggccctggagtccctggc
ccccagggcgaaagtttccccagttctcctggagagagaggccccactggttacccaggc
ccaaaaggatttccaggaccttcagggcccccaggacgaggtgtaatcggagcagtagga
aagcgaggggctcctggggactcaggacccgaaggaattcctggccccccggggctgaag
ggcgttagaggtgacactctgccctgtgtacccagaaaccccggggcccccggagagaaa
ggagatactggaaatgcagggaacctaggtgtcctgggttctccaggttttcgtggcatc
actggacctgatggagctaaaggagacaaaggacagtttggacttcctggtcgacctgga
cgacaaggacctccaggtgttgttggagaccccggagatgaaggccgtgaaggcttcagt
tacgatggagatccaggctccccggggcgcccaggctctgccggcctcagaggcccagca
ggagactctgctgttgggccctcaggaccaatcggcttcccagggccaccgggcgctcag
ggtcctaaaggagtccccggaccacccggcaacgacggactaccaggaatactgggtctg
gctggtgggcctggagtgaagggccagagaggacaggatggggcccctggtatacttggc
cccaaggggcccacctctaacctctgtgaggcaggaaaacctgggcccatgggactcttt
ggccctcagggaaccataggacccccagggtgtgtgggggagaaaggtgtggtcggggag
atgggtcctccaggtgtaggccctcagggtcctaaagagaaaccaggcagcccaggtttc
cctggtcaaccaggaccccagggcccctcaggcctcagtggagaccccggcctgccgggg
cctggtggtgagaaaggtccgatgggaccccagggccaggatggggagctgggggcccct
ggacagactggggccttcggagccccagggagaaagggggagggagggctcaacggagaa
gacgggggtctgggatgcgaggggcccaaaggagagaaaggctgtaaagggttcccgggg
cctgaaggagatacctatggtgtgcccatcaaaggacagcctggagaagatggaccgcct
tgttcccccggctttcctggaccaagaggaaataaaggtctgagaggagctaacggtaac
ccaggatgtccaggcatgaatggacccccaggcatcgtaggaatccctggaccccccggg
ccctacggaccaccaggaccaccaggatcacctggacgcacaggaccaccaggctacatc
ggcttccctggagaaactggagatgagggggacctgggatgtccagggaaagatggagaa
cccggtcaccaagggtgtaccggatccaaaggtgatccaggagactctgttggtgttttt
ggtccacctggagacaagggccctcctggagacttcgggaccccaggagctcctggacct
cgaggagatcctggaagacccggtttcttagggcgtccaggagagagaggatgtaaagga
gatccaggccagagcggggatctgggcccaccaggtgtggtcggtccctcaggtcccaga
ggtcgtccaggttttccaggtcttccaagtaaagctggtgctgatggtcctccaggtcca
cagggctgcccaggactccaaggtcctcctggaccgctggggcttcacggactggatgga
ctgaaaggcgtaaagggggacatgggaaccagaggtctgggtgtgccgggtcctccaggt
tccaaaggtcttccaggagataaaggtcctcttggtcctccgggaccctatggttcatcc
cagcccggcccaccaggaccccggggtcctccaggagcccaaggaccaccaggggggttg
ggccctaaaggtaaatctggatcggactgtaaagctnccgatcccgggcctcgaggcgat
cctggttgtgctggaacagatggagagccaggatgtgcaggggaaatcggagcaccaggt
gacaacactccggtgcccggagatgacggggaaaacggggacacaggctgcccggggaca
aagggccaaaagggatctcaggggccccaaggacaaccaggcctctctgggaatccagga
gcaaaaggtattcgggggtcttcaggtccaatgggactgcctggcagtaggggtcctaga
ggttttacgggccctggagggttcacaggaccaaacggatttactgggccagttggtcca
aagggggagaagggccgggtgtccccctgccccgcttaccctcccgcgacacaggggccc
ccaggagatccccgcccccccggtacacctggtgacgtcggacttcagggagaaattggt
cagactggccccaaaggtagaaagggggacctcgggcctgagggtccgacaggccctgat
gggcccctgggtccagacggggaccgaggagagctgggccagcaggggaagcgtggacta
gtgggagccaaaggggatcccgggccaattggtgaccgcggaccctccgggccctcgaag
aacctgaactcgggcttcatgctggtgatgcacagccaatcaaggctgatcccaacctgt
ccccctagcatgagggtcctgtgggtgggatacagcctgctgtatctggaggggcaggag
aaggcgcacactcaggatctgggccaggcgggctcatgtatgcgggtcttctccaccatg
ccgttctcctcctgcaacatggggaagtgctcctatgccagtcggaacgacaaatcctat
tggctgtccacgacagcggcagtccccagcatcccggtgggcggagcctccatcgaggag
cacatcagccgctgcgttgtgtgtgaagccccctcctctccggtcgctctgcacagccag
acttccacccagccggactgccccccccaatggaggagcctgtggaccggatactccttc
ctcatgcatacaggtgcaggggacgagggcggcggccagtctctgacgtcctcgggaagc
tgtctgatggacttcagggcccagcccttcgtagagtgccaggggccccggggaacctgc
cactacttcgccaacatctacagcttctggttgacccgggtggaggcggcgtcctccttc
acctcggcctccgacagcccctccaccaccctgaaggagagctggcagcagagggagagc
atcgggaggtgcaacgtctgcatgagggagtga
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