Eleginops maclovinus (Patagonian blennie): 134880732
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Entry
134880732 CDS
T09869
Symbol
ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03022
Basal transcription factors
emac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134880732 (ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
134880732 (ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emac03021
]
134880732 (ercc2)
03036 Chromosome and associated proteins [BR:
emac03036
]
134880732 (ercc2)
03400 DNA repair and recombination proteins [BR:
emac03400
]
134880732 (ercc2)
Enzymes [BR:
emac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
134880732 (ercc2)
Transcription machinery [BR:
emac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
134880732 (ercc2)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134880732 (ercc2)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
134880732 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
134880732
NCBI-ProteinID:
XP_063763857
LinkDB
All DBs
Position
18:complement(26398938..26409771)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNIDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
KAFPLEVTKLIYCSRTVPEIEKVVEELRRLMEFYSKQTGESNNFLALALSSRKNLCIHPE
VSALRFGKEVDGKCHTLTASYIRAQRHSDSSVPVCRFYEEFDAVGRQVPLPAGIYNLDDL
KDFGRRKGWCPYYLARYSLMHANIVVYSYHYLLDPKIADLVSKELAKSSVVVFDEAHNID
NVCIDSMSVNITRRTLDRCQTNVDTLQSTIQKIKETDAARLNSEYRRLVEGLKEANVARE
TDVYLSNPVLPDEILREAVPGSIRTAEHFVRFLKRFLEYLKSRLRVHHVVQESTPQFLKD
IFDKVCIDRKPLRFCAERLQSLLRTLEIADIADFSAVTLISNFATLVSTYSQGFTIIIEP
FEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVIITSGTLSPLDIYPRILDFRPVTMAS
FTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAVVPDGIVAFFT
SYVYMENIVASWYEQGILENIQRNKLIFIETPDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQVRENDFLTFDAMRHA
AQCVGRVIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHITDGSLNLTVDEAVQLSKHF
LRQMAQPFRQEDQLGLSLLTLEQLESEEMLKKIAQIAHQT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaatatcgatggtctgttggtgtattttccatatgactacatatatcctgag
cagtactcctacatgctggagctgaagaggactctggatgctaagggtcatggagtcctg
gagatgccttcaggaacagggaaaactatctctttgctgtctctcattgttgcctaccaa
aaggcctttcctttggaagtgaccaagctgatatactgctccaggacagttcctgagatt
gaaaaggtcgtggaggagctgcggaggctgatggagttttattccaagcaaactggtgaa
agcaacaacttcctggctctggccctctcctccagaaaaaacctgtgcatccaccctgag
gtgagtgctctgcgcttcggcaaagaggttgatgggaagtgccacaccctgacagcctcg
tacatccgtgcccaacgccacagcgactccagcgtgcctgtgtgccgcttctacgaggag
tttgatgctgtcggccgtcaggtgcctctgcctgcaggcatctacaacctggacgacctg
aaggactttgggaggaggaaaggatggtgtccttattatctggcacgctactcgctcatg
cacgctaacatcgtggtgtacagctaccactacctgctggaccctaagatcgctgacctg
gtgtccaaagagctcgccaagagttctgtggtggtgtttgatgaggctcacaacatagac
aatgtgtgcatcgactccatgagtgtgaacatcaccagacggactctggatcgctgccag
accaacgtggacactctgcagagcaccatacagaagataaaggagacagacgctgctaga
ctcaacagcgagtacaggcggctggtggaagggctgaaagaagccaatgttgccagggaa
acagatgtctacctctccaatcccgtgttaccagatgaaatccttcgagaggcggtccct
gggtctatccgcacagcagagcattttgttcgtttcctaaagcgtttcctggagtatctg
aagtcccgtctcagggtccatcacgtggtccaggagagcaccccacagttcctcaaagac
atcttcgacaaagtctgcatcgaccgcaagcccctcaggttttgtgcagagcggttacag
tcgttgctccggactctggagattgcagacatcgcagacttctcagctgttactctcatc
tccaactttgccaccctggtcagcacctacagccaagggttcaccatcatcatcgagccc
tttgaagacagaactcccaccatcgccaaccccgtgctgcacttcagctgcatggacccg
tctatcgccatcaaaccagtgttccagaggtttcagtcggtcatcatcacctctgggact
ctctctccactggacatctatcccagaatccttgacttccgcccggttaccatggcatcc
ttcaccatgacgctggccaggacctgcctctgtcctctgattgttggcagggggaatgac
caggtggcgctgagctcaaagtttgagaccagagaagactttgctgtgattcgtaactat
ggcaacctactccttgaaatgtctgcggtcgttccggacggcatcgtggcatttttcacc
agctacgtctacatggagaatatcgtggcgtcgtggtatgaacagggtatcctggagaat
atccagaggaacaagctgatcttcattgagactccggacgctgcagagacgagcatggct
ctggagaaataccaggaggcctgtgagaacggcagaggagccatcctgctgtctgtggcc
cggggaaaggtgtctgagggaatagactttgttcaccatttcgggcgtgcagtcatcatg
ttcggagtgccgtatgtttacactcagagccgcatcctgaaggcccggctggagtacctc
agggatcagttccaggtcagagagaacgacttcctgaccttcgatgccatgcgtcacgcg
gcccagtgtgtgggcagagtcatcagaggcaagaccgactacggactcatgatctttgct
gacaagcggtacgcccgagcagacaaacgtgggaagctccctcgctggatccaggagcac
attactgacggcagtctgaacctcactgtggacgaggccgtgcagctctccaaacacttc
ctgaggcagatggctcagcctttcagacaggaggaccagctgggtctctctttgctgact
ctggaacagctagagtctgaggagatgctgaagaagatcgctcagatcgctcatcagacc
tga
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