Entry |
|
Symbol |
trpc4b
|
Name |
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 4b
|
KO |
K04967 | transient receptor potential cation channel subfamily C member 4 |
|
Organism |
emac Eleginops maclovinus (Patagonian blennie)
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Brite |
KEGG Orthology (KO) [BR:emac00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:emac04040]
134880809 (trpc4b)
Ion channels [BR:emac04040]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134880809 (trpc4b)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
18:complement(18481125..18489455)
|
AA seq |
916 aa
MSQLYYKKNDSSSYRDRIPLRIVRAESELSALERAYLGAVEKGDYASVKQALEEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLSYNVYLGDALLHAIRKEVVGAVELLLNHKK
PRGEKKVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQRSVSIPQPHAVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELGELSTVENEFKSE
YEELSHTCKQFAKDLLDQTRSSKELEIILNYRDDINPLLDDNTNDLARLKLAIKYCQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKLITCIFIGLLFPLLSIFYLFSPKCRYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIASVQKDYQGPPPTTVEWMILPWVLGFIWTEIKQ
MWDSGFKDYIDDWWNLMDFIMNSLYLATISLKIVAYAKYSGHKPRDNWEMWHPTLIAEAL
FAIANIFSSLRLICLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YNDDKEKCYGVRCQNQNNAFSTLFQTLQSLFWSIFGLISLYVTNVGPDHKFTEFVGSTMF
GTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNIIP
SPKSVFYLFGWIKTHLFRRTSIKRLETFETLGRRAADNVRLNYEYQGVLKNLVKRYVAAM
IRDAKTEEGLTEENFKELKQDISSFRFEVLGMMKGKPQGEGVAGNVLGSALAYPGNCFKY
SPKFPIDEPQQKLSLFDMTNPTLQSGASATSIPVGSNSQANGSVVLSSTEQTLNKLCKTV
SDAVSPKRRSRLPSLCDEIYSLSEEDMLGTDGQNQGDLLQTEKSIIECLRQADKDIQEIE
HSCKEQTKEVNNGPKK |
NT seq |
2751 nt +upstreamnt +downstreamnt
atgtcacagctgtattacaagaaaaatgactcctcttcatacagggaccgcatccccctg
cgtattgtacgggcagagtctgagctctctgcccttgagagggcctacctgggggctgtt
gagaagggggactatgccagtgtaaaacaagccctggaagaggctgagatctacttcagg
atcaacatcaactgcattgaccccctggggcgcacagctctgctcattgccattgaaaat
gagaacctggagatcattgagctgctgctcagctataatgtatatttgggtgatgccctg
ttgcatgccatccgcaaagaagtggtgggggccgtggagctgctgctcaaccataagaag
ccacgcggggaaaaaaaggtcccaccaattctactggacaaacagttttcagacttcaca
ccggacatcactccaatcatccttgctgcccacaccaacaactatgagatcattaaactg
cttgttcagcgaagtgtttccatacctcagccacatgctgtgcgttgtaactgtgtagag
tgtgtctccagttcagatgtggacagcctacgtcactcacgctcgcgcctcaacatctac
aaggcccttgccagcccatctctcatcgccctctccagcgaggatcctttccttacagct
tttcaactcagctgggagcttggggagctcagcacagtggagaatgagttcaagtcagag
tatgaagagctgtcccatacatgtaaacaatttgcaaaggacctcttggaccagacccga
agttctaaagagttggaaataatcctcaactaccgtgatgacatcaaccccctgctagac
gacaacacaaatgatctggcccgactcaagctggctatcaaatattgccagaaagagttt
gttgctcagcctaactgtcagcagctgctggcttctcggtggtatgatgagttccctggc
tggaggaggcggcactgggcaggaaaactcatcacgtgtatcttcattggcctcctcttc
ccactgttatccatcttctacctgttctctccaaagtgccgctatggcttattcattcgt
aagcccttcatcaagttcatctgtcacactgcttcctacctgaccttcctgttcctgctc
cttctggcctcgcagcacatagcgtctgtgcaaaaggactatcaaggcccaccacccacc
acggtggaatggatgatcctgccctgggtgcttggctttatctggactgagatcaaacag
atgtgggatagtggtttcaaagactacattgatgactggtggaacttaatggactttatt
atgaactccttgtatcttgcaacaatttctctgaaaattgttgcctatgcaaagtacagt
gggcataaacccagagacaactgggaaatgtggcacccgactttgatagcagaggcattg
tttgccatcgccaacatcttcagctccttgcgcctcatctgccttttcactgccaactct
caccttggccccttacagatctcactgggccgcatgctcctggacatcctcaagtttctc
ttcatctattgtctggtgctgttagcctttgccaatggcctcaaccagctatacttttat
tataacgacgataaagagaaatgctacggcgtacgctgtcaaaatcaaaacaacgcattc
tcaacgctgttccagacgctgcagtcattattttggtcgatatttggcctaatttcccta
tatgttaccaatgtgggaccagaccataaattcactgagtttgtgggctccaccatgttt
ggcacgtacaatgtcatttccctggtagtgcttttaaatatgctaattgccatgatgaac
aactcctaccagcacattgctgatcatgccgatatagagtggaaatttgcaagaacaaaa
ttatggatgagttattttgaagaagggggaactctgccttctcctttcaatataataccc
agcccaaagtctgttttttatctatttggatggattaagacacatctcttcaggagaaca
agcataaaaaggcttgaaacattcgaaactctggggagacgagcagccgataatgtgaga
ttaaactatgaatatcagggggttttgaagaacctcgtgaagcgttatgtggctgcaatg
atcagagatgcaaagacggaggaagggctgacagaggagaattttaaggagcttaagcag
gacatctccagcttccgctttgaagtcctgggaatgatgaagggtaaacctcaaggtgag
ggggtcgctggtaacgttctaggctccgccttggcttaccctggaaattgtttcaaatat
tctcccaaattccctattgatgagccacaacagaagctgagcctgtttgacatgaccaac
cccaccctgcagagcggagcgtccgccacctccatccctgtgggctctaacagtcaagcc
aatggttcagttgtcctgtccagcacagagcagactctgaacaagctatgcaaaactgtc
tcagatgctgtgtcccccaagagacggagcagactcccctctctctgtgatgaaatatac
tcattgtcagaggaagatatgttgggaactgatggacaaaaccaaggagacttacttcag
actgagaaatccattattgaatgcttacggcaagcagataaggacattcaggagattgag
cattcctgcaaagaacaaactaaggaagtgaacaatgggccaaaaaaatag |