Eleginops maclovinus (Patagonian blennie): 134881415
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Entry
134881415 CDS
T09869
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03013
Nucleocytoplasmic transport
emac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134881415 (pnn)
03015 mRNA surveillance pathway
134881415 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134881415 (pnn)
03041 Spliceosome [BR:
emac03041
]
134881415 (pnn)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134881415 (pnn)
Spliceosome [BR:
emac03041
]
Complex C
Other components
EJC/TREX
134881415 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
134881415
NCBI-ProteinID:
XP_063764795
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Position
19:complement(4369727..4378876)
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AA seq
680 aa
AA seq
DB search
MAVVVRSLQDQLEKAKQSLKNVDDNIRKLTGRDPNESRPGQIRRLGGPMAGPGGGRGRGM
NLLRRSLSDIGSAGPPAKQRDIEGALLRLAGDQRARRDARHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTIDERGKQRNRRMFGLLMGTLQKFKQESNVSTDKLKRRTEIEQK
LEVQAEAEKKKVETDKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNHLVKYIRTK
TKPHIFYAPGKMCSATQKLLDESTKKLHAVFEERREAFAEHLSKMESRPRRQPNRDQEAN
ATGTDRPAEGKPAGQVVKVTANRGDAEMEEDEEDEDEEMEERQKEAAKKIKTKVVEEEGR
GKEVLLKVGEEVEGMELSEEVREVEEDKKGEEGVKAVEDKGEKEASLGSQEMEMGGEGEG
RKQKEDRAMVDEGGAERNHPELQNEKPQETPSSEPSAPSQEAADSGPQPPLSPPVGEPAE
KPSEIPEPQTAHVAPEQEVITPGPMMQSSASESQAVEGRLVEEAPEKPAKSLEAPDNTPT
PSKKEEEGGRGRKKAKEPKKSRKSSSSSSSGSSSSGSSSSSSGSSHSSSSSSSSSSSSSK
SSSRSRSRDGSKRKRRPSERAKDRKKGEERSHRKRGGSGGGGRDSKASKERKKRRSEEGR
GRSSRSDREHKDRDRKDKRR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtagtgcggagcttgcaagaccagctcgaaaaagcgaaacaaagcctgaaa
aatgtggacgataatattcgtaaattaacgggccgtgaccctaatgaatcaagaccggga
caaatccgtcggctgggcggtcccatggcaggcccgggtggaggtagaggcagagggatg
aacctgctcaggcgtagtctctcagacatcggaagcgctggcccccccgccaagcagagg
gacatcgaaggagccctactcaggttggcgggggaccagagagccaggagagacgcgcgc
cacgacagcgacgccgaggatgatgacgatgtcaaaaagccggcgttgcagtcgtctgta
gtagctacctccaaggagagaacacgccgagacctcatccaagatcaaaccatcgatgag
aggggcaagcagaggaatcggcgtatgttcggcctgctcatggggaccctgcaaaaattc
aaacaggaatcaaacgtctcaacagataagctaaagcgacgcacagagatcgagcagaag
cttgaggttcaggcggaggctgagaaaaagaaggtggagactgacaagagggagctcttc
gaggagaggagagccaaacagactgagctgagactgctggagcagaaagtggaattagct
cagctgcaagaggagtggaccagccataacaaccatctggtgaagtacatccgcaccaag
accaagcctcacatcttctacgcgcctgggaagatgtgctccgccacacagaaactcctc
gacgagtccaccaagaaactccacgctgtgtttgaggagaggcgcgaggcttttgccgag
cacctcagtaagatggagtcccgcccccggcgacagccgaaccgagaccaggaggccaac
gcgacaggaacggaccgcccggcggagggtaagccagcaggtcaggtagtcaaggtgaca
gctaacaggggggatgcagagatggaggaagacgaggaggatgaggatgaggagatggag
gagaggcaaaaggaagcggctaaaaagatcaagacaaaggtggtggaggaggaggggagg
gggaaagaagttttgctgaaggttggggaagaagttgaggggatggagctgagtgaggag
gtgagggaggtggaggaggacaagaaaggagaggagggagttaaagctgtagaggacaag
ggagagaaggaggcaagcctagggtcacaagagatggagatggggggagagggggagggc
aggaaacagaaagaggacagggctatggtagacgaggggggggcagagaggaatcaccca
gagctccagaatgaaaagccccaggagaccccatcctccgaaccaagcgcacccagccag
gaagcagcagacagcgggccccagccccccctcagccctcctgtgggggagccagcagaa
aagccttctgagatcccagaaccccaaacagcccatgtggctcccgaacaggaagtgatc
acgcctggccccatgatgcagagctcagcctctgagagccaggctgtggaggggagactg
gtggaggaggctcccgaaaaaccagccaagtccctggaggcccccgacaacacccccact
ccctcaaagaaggaagaggagggtgggagaggcaggaaaaaagcaaaggagccaaagaaa
agccgcaaaagctcctcctcttcctcctcgggatcctcgtccagcgggagctcatcttct
tcctccggctccagtcactcctcgtcctcctcctcgtcttcttcgtcctcctcgtccaaa
agcagcagccggagccgcagcagagacggcagcaagcgcaagaggaggccgtctgagagg
gctaaagaccggaagaagggggaggagaggagtcaccgcaagagaggggggagtggtgga
ggagggagagactcaaaggcgtccaaggagaggaagaagagaaggagcgaggaagggagg
ggcaggtcctcccgcagtgatagggagcataaagatagagacaggaaggacaagaggcgc
taa
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