Eleginops maclovinus (Patagonian blennie): 134881519
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Entry
134881519 CDS
T09869
Symbol
dicer1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
emac03036
]
134881519 (dicer1)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
134881519 (dicer1)
microRNA pathway
RISC loading complex
134881519 (dicer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
134881519
NCBI-ProteinID:
XP_063764985
LinkDB
All DBs
Position
19:complement(2454107..2492045)
Genome browser
AA seq
1896 aa
AA seq
DB search
MAGLQLVTPATSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAAIEHNTIVCLNTGSGK
TFIAVLLTKELSHQIRGHYQENAKRTVFLVNTALTVVQQAAAVRTHSDLQVGEYIDVEET
SAWTDQQWSQEIIQNQVLVMTCHIFLHVLRKKILPLSKINLVVFDDCHLAITEHPYCEIM
KLFDGSSCCPRILGLTASILNGKCDPSELEQKILNLERILKSNAETATDLVVLDRYASQP
REVVLDCGPYLDKSGLSLCLQEELEEALHFLNDCNICVTREDRDPTFISKQVLGDCLAVL
MVLGPWCADKAAGIMVREIQKYIKHEQEELSRKFLLFTDTILRKVHALCEEHFSPASLDL
KFVTPKVLRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEVEVKERP
EANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPR
NKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPVSNYIMLADSERTRGFEEDLTTYKSIEKILRNKCSKSVEVSEYEVDQVLDDDNI
LPPYVLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTAERPDARFQSTLYLP
INSPLRVPLKGPVMFCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHD
EEETSVPGRPGSTKRRQCYPKAIPECLRDSYAVPEQTYYLYVVGMVLTTPLPDELNFRRR
KLYPPEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFTLTTAQLDLITRLH
QYIFSHILRLEKPALEFKPTLADSAYCVLPLNIVEDSNTLDMDFSFMEDIERSEARTGIP
TTQYTKQNPFSFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAE
YYKTKYNLDLSNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNK
QILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASEAGVGAQTLPPDFR
YPNLDFGWKRSIDSKTFISCPDSCSDDDDDDDDDEGSCGHQETETPDPSSLTHPSSSVPP
EPESAPCMVTLTNGTALATDCDEDEHLHQQDDCQRSRPRSPLPQSPESIQSTTSLPVQPR
PPSSKTPSSSPPQPSDECTTGRASNTATSVCCPPGPAAPSDQYGAPAGESPKSLGPNPGL
ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL
YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSITDILDSEEVKEELLANGQSGTDF
DEDDEEAEECEEVEEEEEEGEGLILKEEPKDEVNMEDDLEYYKEHIKFIDNMLLGSGAFG
KKISLSSFPPSITPATASASSPTVESPYEWKPPKKPLHPTAAHYPPEPAPSGPSAEEFDY
SSWDAMCYLDPSKAGEEDDFVVGFWNPSEENCGAELGKQSISYDLHTEQCIADKSIADCV
EALLGCYLTSCGERAAQMFLCSLGLKVLPLERGALTGGVVPSGQINTLDLNYGWLKIPPR
SRLDHHPDADGTLNHLISGFENFERKINYTFQNKTYLLQAFTHASYHYNTITDCYQRLEF
LGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAISPELF
HVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSRMS
LETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVG
KGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNN
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctacagctggtcacccctgccacttcacccatggggcctttctttggtctg
ccatggcagcaggaggctatccatgataacatctatacaccgaggaaatatcaggtagaa
cttcttgaagcagctattgaacataatactattgtctgcttgaatactggctcagggaag
acctttattgcagtacttctaacaaaagagctctcccaccaaatccgtggacattaccaa
gaaaatgcgaagaggaccgtttttctggttaacacagctctgactgtggttcagcaggcc
gctgcagtcaggactcactctgacctccaggtgggagagtacatagacgtggaggagacg
tcagcatggactgaccaacaatggagtcaagagataatccagaatcaggtgctggtcatg
acctgccacatattcctgcacgttctaaggaagaaaatcttaccgttgtctaaaatcaac
ttggtggtttttgatgattgccacctggccatcaccgagcacccgtactgtgagataatg
aagctgtttgatggctcctcatgctgtcctcgtatcctgggtctcaccgcctccattctg
aacggaaagtgtgacccgtcagagctggagcagaagatcctgaatctggagaggattctg
aagagcaatgccgagaccgccactgacctggtggttctggacagatacgcctctcagccc
agagaagtggtgctggactgcggcccctacctggataagagtggtctctctctgtgtctg
caggaggagctggaggaagcgctccacttcctgaatgactgcaacatctgcgtcaccaga
gaggaccgggaccccaccttcatctccaagcaggtcctgggggactgcctggctgtgctc
atggttttggggccctggtgtgccgataaggccgctggcatcatggtgcgcgagatccag
aagtacatcaaacacgagcaggaggagctcagccgcaagttcctgctcttcaccgacacc
atcctgcgcaaggtgcacgccctgtgcgaagagcacttctcccccgcctccctggacctc
aagttcgtcacccccaaggtcctccggctgctggagatcctgcacgagtacaagcccttt
gagcggcagcagttcgaaagtgtcgagtggtacaacaaccgcaaccaggacaactacgtc
tcatggagcgactcggaggatgaagatgaggacgaggaggtggaggtcaaagagaggcct
gaagccaacttcccctcgccgttcaccaacatcctgtgtgggatcattttcgtggagcgg
cgctacacggcggtcgtcctcaaccgactgatcaaagaagcggggaagcaggacccggag
ctggcttacatcagcagcaacttcatcaccggacacagcattggcaagaaccagccgcgg
aacaagcagatggaggtggagttcaggaagcaagaggaggttcttcgcaagttccgcgct
catgaaaccaacctgctgatcgccaccagcatcgtggaggagggcgtggacatcccaaaa
tgtaacctggtggtgcgcttcgacctgcccacagagtaccgctcctacgtccagtccaaa
ggcagagcgcgagcccccgtctccaactacatcatgctggctgacagcgagaggaccaga
ggctttgaggaagatctcactacctacaagtccatcgagaagatcttaaggaacaagtgc
tccaagtcggtggaggtgagtgagtacgaggtggatcaggttctggacgatgacaacatc
ctcccgccatacgtgctccgctctgaggacggaggcccccgggtcaccatcaacacggcc
atcggacacatcaacaggtattgcgctcggctgcccagcgaccctttcactcacctagca
cccaagtgtaaaacagcagagagaccggacgcacgcttccagtccacgctctacctaccc
atcaactcccctctgagagtccctctgaagggtcctgtaatgttctgtgccagactggca
gagaaagcagttgctcttctgtgttgtgagaaacttcacaaaataggtgagctggatgat
cacctgatgccggtgggaaaggagacggtgaaatatgaggaggagttggacctccacgat
gaagaggagaccagcgtaccaggccgacccggctccaccaagaggaggcagtgctaccct
aaagccatacctgagtgtctgcgggacagttacgcagtcccagagcagacgtactaccta
tacgtggttgggatggtgctcaccacccccctccctgatgaactcaacttccgcagaagg
aagctgtacccaccggaggacaccaccaggtgcttcggcatcctgactgccaaacccata
cctcgaatcccccatttcccggtgtacacccgctcgggtgaggtgaccatctccatcgag
ctgcagaagtccggcttcacgctgaccaccgcccagctggacctcatcacccgcctgcac
cagtacatcttctcccacatcctccgcctggagaaacctgcactggagttcaagcccacg
ctggctgactcggcctactgcgttctacctctgaatattgttgaggactccaacacacta
gacatggacttctccttcatggaggatatcgagaggtctgaggcccggaccggcattcct
accactcagtacaccaagcagaaccccttcagcttcaagctggaggactaccaggatgct
gtcatcattccacggtatcgtaactttgaccagcctcatcgcttctacgtcgccgacgtg
tacacggacctgacgccgctcagcaagttcccctctccagagtacgagacgtttgctgag
tactacaaaaccaagtacaacctggacctgtccaacctgaaccagccgctcctcgatgtg
gaccacacctcctcgagactgaacctgttaacccctcggcacctgaaccagaaaggcaaa
gccctgccgctcagcagcgcagagaagaggaaggctaaatgggagagtctgcagaacaaa
cagatcctggtcccagagctgtgtgccatccaccccatccccgcctccctgtggaggaaa
gcagtgtgtctgcccagcatcctgtaccgcctccactgcctgctgactgcagaggagctc
cgagcccagaccgccagtgaggctggagtgggggctcagaccctcccccccgacttcagg
tatccgaacctggactttggctggaagcggtccatcgacagcaagacgttcatctcctgc
cccgactcctgcagtgatgatgatgatgatgatgatgatgatgagggttcctgtgggcac
caagagactgaaacccctgaccctagctccctaacgcatcccagcagttcagtcccccct
gagcccgaatcagcgccctgcatggtgaccctaaccaacggcactgccctcgccaccgac
tgcgatgaagacgagcaccttcaccaacaggacgactgccagcgctcccggccccgctcc
cctttgccgcagagtcctgaatcaatacaaagcactacctcacttcctgtgcagccccgc
cctcccagctccaagacgcccagttccagtcctccgcagcccagtgacgaatgtacaaca
gggagggcctcgaatacagctacctcagtctgctgcccaccgggtcccgcagcaccttct
gatcagtacggagccccggcaggagaatcccccaaaagcctggggcccaaccctggtctc
atcctgcaggcgctgaccctctccaacgccagcgacggcttcaacctggagcgcctggag
atgcttggagactctttcctcaaacacgccatcaccacgtacctgttctgcacctacccc
gacgctcacgagggccgcctcagctacatgcgcagcaagaaggtgagcaactgtaacctg
taccgcctggggaagaagaaggggctccccagcaggatggtggtgtccatcttcgacccc
cccgtcaactggctgccccccggatacgtggtgaaccaggacaagagcatcacagacata
ctggactcagaggaggtcaaagaggagctcctggctaacgggcagtctggaactgacttc
gacgaggacgatgaggaggctgaggagtgtgaggaggtggaggaggaggaggaggagggg
gaggggctgatcctgaaggaagagccgaaggacgaggtgaacatggaggacgacctggag
tactacaaggagcacatcaagttcatcgacaacatgctgttagggtcgggggcgtttggc
aagaagatctctctgagcagcttccccccctccatcaccccggccacggcttcggcttcc
tccccaacagtggagtccccatacgagtggaagcccccgaagaagccgctccatcccacc
gccgcccactacccccctgagccggcacccagcgggccctcagccgaggagtttgactac
agctcgtgggacgccatgtgctacctggaccccagcaaggcgggggaagaggatgacttc
gtggtaggcttctggaacccgtcggaggagaactgcggggcggagctgggcaagcagtct
atctcgtacgacctgcacacggagcagtgcattgctgacaagagcatcgccgactgtgtg
gaggctctgctgggctgctacctcaccagttgtggagagagagccgcacagatgtttctc
tgctctctgggcctcaaggtgttgccattggagaggggggctctgacgggtggtgtggtg
ccgagcggtcagatcaacaccttggacctgaactacggctggttgaagatccccccccgc
tcccggctggaccatcatcccgacgccgacggaacgctcaaccacctcatctccggcttc
gagaactttgaaagaaagatcaactacacatttcagaacaagacctacctgctgcaggcc
ttcacacacgcttcctaccattacaacaccatcacagattgttaccagcgactggagttc
ctcggcgatgcaattttagactacctcattacaaagcacctttatgaagacccccggcag
cactctccgggcgtgctgaccgacctgcgctcagcactcgtcaacaacaccatctttgcc
tctctggccgtcaagtacgactaccacaagtacttcaaggccatctcgcccgagcttttc
cacgtcatcgacgactttgtgcagttccagctggagaagaacgagatgcaaggcatggac
tccgagctgcggcgctcagaagaagacgaggagaaggaggaggacatcgaggtcccgaag
gccatgggggacatctttgagtctctggccggagccatctacatggacagccgaatgtct
ctggagacggtgtggcaggtgtattatccaatgatgaggcccctcatagaaaaattctct
gccaatgtgccacgctctcctgtgagggagctgctggagatggagccagaaactgccaag
ttcagccctgcggagaggacgtatgacgggaaggtgcgtgtgacagtggaggtcgtgggg
aagggcaagttcaaaggtgtcggccgcagctaccgcatcgccaagtccgcggcggcacgt
cgagctctgcgcagcctcaaagccaatcaacctcaggtcccaaacaactga
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integrated database retrieval system
