Eleginops maclovinus (Patagonian blennie): 134881588
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Entry
134881588 CDS
T09869
Symbol
vps39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04140
Autophagy - animal
emac04142
Lysosome biogenesis
emac04145
Phagocytosis
emac04148
Efferocytosis
emac05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
134881588 (vps39)
04142 Lysosome biogenesis
134881588 (vps39)
04140 Autophagy - animal
134881588 (vps39)
04148 Efferocytosis
134881588 (vps39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134881588 (vps39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134881588 (vps39)
Membrane trafficking [BR:
emac04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
134881588 (vps39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
VPS18_solenoid_2nd
Beta-prop_RIG_2nd
P16-Arc
Motif
Other DBs
NCBI-GeneID:
134881588
NCBI-ProteinID:
XP_063765119
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All DBs
Position
19:23346147..23372645
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AA seq
875 aa
AA seq
DB search
MHDAYEPVPILEKLPLQIDCLAAWEDWLLVGTKPGHLLLYRIKKDAGTNRFEVTLEKSNK
NFSKKIQQLYVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGATLFACDLQQTSSGE
ERLRMCVAVKKKIQMYYWKDRDFYELQGDFGAPDIPKSMAWCENSICVGFKRDYYLIRMD
GRGTIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSVELQRPRFITSAGQNIVYVASNHFVWRLVPVSI
ATQIRQLLQDKQFELALQLAMKDDSDGDKKQQIHHIQNLYAFNLFCQKRFDDSMQVFAKL
GTDPTHVIGLYPDLLPSDYRKQLHYPNPLPTMSGAELEKAHLALIDYLTQKRSHLVKQLN
DSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEESE
YVLKKAHKYSELIILYEKKGLHRKALQVLLDQSTKANSPLKGHERTVQYLQRLGVENLGI
IFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDKVLNFLKEGFKELAIPYLEHIVYVWDD
KGPEFHNVLIQLYLERVQGLMKQYLNSLPEGVPAVAAGKEEGDLGEFRNKLLSFLGISTS
YEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTHMAEEYCHSHYNSSVEG
EKDVYLSLLRMYLSPPDVHCLGPINMELSEPQANLQAALHVLELHHSKLNTTKAINLLPA
NTQIREIRVFLESVLEEKAQRKRCNQVLKSLLQAEFLRVQEERIFHQQVKCVITEEKTCR
VCKKKIGNSAFARYPNGVVVHYFCCKDRTVCPTEQ
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcatatgaaccagtgcctattttggagaagcttcctcttcagattgactgt
ctggcggcctgggaggactggctgctcgtgggaacaaagccagggcatctccttctctac
cggataaagaaggatgcgggcaccaaccggtttgaggtgaccctggaaaaatccaataag
aacttctcaaagaagattcagcagctttacgttgtctcacagtacaaaatcctcgtcagc
cttctagagaacaacatccacgtccatgacctcctgaccttccagcagatcaccgtggtg
tccaaagccaaaggagccacgctgttcgcctgtgacctgcagcaaaccagcagcggggag
gaaaggttgaggatgtgtgtggcggtgaaaaagaagatccagatgtattactggaaggac
agagacttctacgagctgcagggggactttggtgcaccggatattccaaagtccatggcc
tggtgtgaaaactccatatgtgttggtttcaagcgagactattacctcatccggatggac
ggcagaggcaccatcaaggagctcttccctactggtaagcagctggagccactggttgcc
ccattggctgatgggaaggtggctgtcggccaggatgacctcaccgtggtgctgaacgag
gaaggcgtctgcacccagaagtgcgccctcaactggacagacatccctatagcaatggag
caccagcctccgtacatcatcgcggtgctccctcggtacgtggagatccggacgtttgag
cccaggctgctggtgcagagcgtggagctgcagagacctcgcttcatcacctccgccggg
cagaatattgtgtatgttgccagcaaccactttgtgtggcgcctggtgccggtgtccatt
gccactcagatccggcagcttcttcaggacaagcagtttgagctggctctgcagctggcg
atgaaggacgattctgacggggataagaagcagcagatccatcacatccagaatctctac
gccttcaatctgttctgccagaagaggttcgatgactccatgcaggtgttcgccaaactg
ggcacagatcccacccacgtgatcgggctgtaccccgacctgctgccctcagattaccgc
aaacagctccactacccaaaccctctgcccactatgtccggggccgagctggagaaggct
cacctggccctcatcgattacctcacacagaaacgcagccaccttgtgaagcagctgaac
gactccgacccctcgacgacctctccgctcatggagggcacgccgaccatcaagagccgc
aagaaactccttcagatcatcgacaccacgctcctgaaatgttacctgcacaccaacgtg
gccctggtgtccccgctcctccgtctggaaaacaaccactgccacatcgaggagagcgag
tatgtcctgaagaaagcccacaagtacagcgagctcattatcctctacgagaagaaaggc
ctgcaccggaaagctcttcaggttcttctggaccagtccacgaaggcaaactctcctctg
aagggccacgagcgcacggtgcagtacctccagagactgggagtggagaatctgggaata
atcttcgagttttctccctgggtgttgaagatctgtcctgaggacggtctgaagatcttc
acggaggacctgaccgaggtggagacgttgccccgagacaaggtgctgaacttcctgaag
gaggggttcaaggagctggccatcccgtacctggagcacatcgtgtacgtgtgggacgac
aagggccctgagtttcacaacgtgctgatccagctctacctggagagggtgcagggcctc
atgaagcagtacctcaactccctgcctgaaggagttcctgctgtggctgcggggaaggag
gagggagatctgggcgagttcaggaacaagctgctgtccttcctgggtatttccaccagc
tacgaaccgtccagactcatcagcgactttccctttgacgggctgctggaggagcgggcg
ctgctgctcggtcgcatgggtaaacacgagcaggcgctcttcatctacgtgcacatcctg
aaagacacacacatggctgaagaatactgtcacagccattacaacagctcagtcgaaggg
gaaaaagatgtgtatctgtcgttgctgcggatgtacctgtcccctcccgacgtccactgc
ctggggccgatcaatatggagctgtcggagcctcaggccaacctgcaggcggcgctgcac
gtcctggagctgcaccacagcaagctcaacaccaccaaggccatcaacctgctccccgct
aacactcagatccgagagatccgggtgtttctggagagcgtcctggaggagaaggctcag
aggaaacgctgcaaccaggtcctgaagagcctgctgcaggccgagttcctccgggtgcag
gaggagaggatcttccaccagcaggtgaagtgtgtcatcacagaggagaagacctgcaga
gtctgcaagaagaagataggaaacagcgccttcgccaggtatcccaacggcgtggtggtg
cactacttctgctgcaaagaccgcaccgtgtgtcccacggagcagtaa
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