Eleginops maclovinus (Patagonian blennie): 134881601
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Entry
134881601 CDS
T09869
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
emac03000
]
134881601 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
emac03310
]
134881601 (roraa)
Transcription factors [BR:
emac03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134881601 (roraa)
Nuclear receptors [BR:
emac03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
134881601 (roraa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
134881601
NCBI-ProteinID:
XP_063765144
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Position
2:complement(11880449..12049077)
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AA seq
519 aa
AA seq
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MESPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAPVRRQTCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQREHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatccagcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagacgctccgaaaagcggaccatccagccccg
gttcggaggcagacctgctccagcaccaacagaggtatctcagtaacaaagaagacacat
acctctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggtgtgataacatgcgaaggctgtaagggcttcttcaggaggagtcagcagagcaat
gcagcctactcctgcccccgtcagaagaactgcctgatcgaccgcaccagccgcaaccgc
tgccagcactgccggctgcagaagtgcctggcagtgggcatgtcacgagatgcggtgaag
tttggccgaatgtcgaagaagcagcgagacagcctgtacgctgaggtgcagaagcaccgg
ctgcagcagcagcagcgtgaacaccaacaacagccaggagaggcggagccactcacacct
agctatggcctctcagccaatggcctcacagagctccatgacgacctcagcggctacatg
gatggtcacactcctgatggcagcaaaccggactctgcagtcagcagcttctacctggac
atccagccatctcctgaccagtcaggcctggacatcaacggcatcaagccggagcccatc
tgcgactttgcccccggctctggctttttcccttactgctccttcaccaatggagaaacc
tcccctacagtgtccatggctgaactagagcacctggcccagaacatctccaagtcccac
atggagacatgtcagtacctgagggaggagctgcagcagatgacctggcaggccttcctg
caagaggaggtggagagctaccagagcaagccccgggaagtcatgtggcagctgtgtgct
atcaaaataacggaggccattcagtatgtggtggagttcgccaagcgcatcgacggcttc
atggagctgtgtcagaacgatcagatagtgctgctgaaagcaggctctttggaagttgtg
tttgtcagaatgtgccgtgcctttgactcgcaaaacaacaccgtctattttgatggaaag
tatgccggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtcttc
gagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctcc
gccttcgtgttgatgtctgctgaccggtcttggctccaggagaaagtgaaggtggagaaa
ctccagcagaaaatccaactggccctccagcacgtcctgcagaagaaccacagagaggat
ggtattcttacaaagttgatatgcaaagtgtcgacactgcgagcgctgtgcagtaggcat
acagagaagcttaccgctttcaaagcaatatacccagacattgtgcgtgcccacttccct
cccttatacaaggagctgttcggatcagactttgagcagtccatgcccgttgacgggtag
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