Eleginops maclovinus (Patagonian blennie): 134882451
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Entry
134882451 CDS
T09869
Name
(RefSeq) transcription factor SOX-13-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
emac03000
]
134882451
Transcription factors [BR:
emac03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134882451
BRITE hierarchy
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
134882451
NCBI-ProteinID:
XP_063766205
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All DBs
Position
20:27993510..28043157
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AA seq
626 aa
AA seq
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MVEPSPPALHLLSGGDVNMACVGVKVEQEECGGGVAVITNTDPPKRSPSRDWPGNHPLEA
RQLTPPLSRSPSEGSPGKELPHRLSPLGLKEARTHGRPEGQSSFKEVMPTIEKLLNADWK
EKLLDKSSVGAGQLKGTPEALAEKELQLLMMINQLSGLREQLLGAHSEQRNMAALLLEKQ
QQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFHHNAQSLQVSTD
PQMTLPLQPIPCKPAVDYPMQLLPNPHATPAKRSSGSFRQEASQPLNLTSKPKGLELGKT
PSPQSLELGALGLHGGYRHRDVQRETSRSPQRTTLSFLGDGDVVTQAIHDAQQLLRGHGS
GGRDRDMERERVGGGKMEYKESPRSERISHVERGEEHLSSDSEGLPNSVPGNYTETRPPP
SSGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILGSRWKGMSNQEKQPYYEEQAR
LSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKNRRQEQRATYTHSQTDPQQLH
YPHSDGPYPGGAGSVSVANMTFHPALLEHYLPQAPPTLRRAEGQATPISLPRERERERER
ERPPYSEGEESDGGERSEGELVLLTD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggttgagcccagccctccagcactgcacctcctctcaggtggggatgtcaacatggcc
tgtgtcggcgtcaaagtagaacaggaggagtgcggtggaggagtcgcagtcattactaac
actgatcctcctaagaggtctccctcacgtgattggccgggaaatcatccgcttgaggcc
cgccagttgacgccaccgctctcccgatccccttcggagggctctccaggtaaggagctg
cctcacaggctaagcccactaggactgaaggaagcaaggacacatggtcgacctgaggga
caatccagcttcaaggaagtaatgccgaccattgagaagctgctgaatgctgactggaag
gagaaacttctggataaaagctcagtgggagcaggacaactgaaaggtacccccgaggct
ctggcagaaaaggagctccagttgctgatgatgatcaaccagctgagcggtctgagggag
cagctcctgggagcccactctgagcagaggaacatggccgccctgctgctggagaaacag
cagcagcagatggagctggctcgacaacagcaggaacagatcgccaagcagcagcagcag
ctgatccagcagcagcacaagatcaacctgcttcagcagcagatccagcaggtgaacatg
ccctacgtgatgatcccggctttccaccacaacgcacagtccctccaggtctccacggac
ccccagatgacattgccactgcaaccaatcccatgcaaaccagcagtggactatcccatg
cagctgctgccaaaccctcacgccacccccgccaagaggagcagtggttccttccgacag
gaagccagtcagcccttgaacctgacctccaagccgaagggtctggagctggggaaaacc
ccgagtccgcagagcctggagctgggagcgctggggctgcacggagggtaccggcacaga
gacgtccagagagaaacgtcccgaagcccgcagcgaaccaccctcagtttcctcggagac
ggagacgtggtaactcaggccatccacgacgcccagcagctcctgaggggccacggcagc
gggggccgagacagagacatggagcgagagagggttggtggaggcaagatggagtacaag
gaatctccccgcagcgagaggatttctcacgtggagcgaggcgaggagcacctcagcagt
gactctgagggcctgcccaactctgtcccaggcaactacactgagacccgcccccccccc
tcttccggccacatcaagagacccatgaacgccttcatggtttgggccaaggacgagcgc
aggaggatcctgcaggccttccccgacatgcacaactcctccatcagcaagatcctgggc
tccaggtggaagggcatgtccaaccaggagaagcagccctactacgaggagcaggcgagg
ctgagcaggcagcacctggagcgctaccccgactacaagtacaaaccccggcccaaacgc
acctgcatcgtggaggggcggaggctgagggtgggcgagtacaaggccatgatgaagaac
cgccggcaggagcagagagcgacctacacacacagtcaaacagacccccagcagctccac
tacccccacagcgacggtccgtacccgggcggcgccggctcggtctcggtggcgaacatg
acctttcaccccgctctgctggagcactacctgccacaagccccgcccactctgcggcgg
gcggagggccaggccacgcccatatccctgcccagagagagggagcgagagagggaaagg
gaacgccctccctacagcgagggggaggagagtgacggaggggagaggagtgagggggaa
ctggtgctcctcacggactga
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