Eleginops maclovinus (Patagonian blennie): 134882636
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Entry
134882636 CDS
T09869
Name
(RefSeq) WD repeat-containing protein 82-like
KO
K14962
COMPASS component SWD2
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134882636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134882636
03036 Chromosome and associated proteins [BR:
emac03036
]
134882636
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134882636
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
134882636
COMPASS/SET1 complex (yeast)
134882636
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cofilin_ADF
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_WDR19_1st
PAC11
Motif
Other DBs
NCBI-GeneID:
134882636
NCBI-ProteinID:
XP_063766524
LinkDB
All DBs
Position
20:complement(16113127..16123854)
Genome browser
AA seq
601 aa
AA seq
DB search
MKITDSVFRSFRVARTFRQNSQKVNCVDFSPNGENAISSSDDDCIVLYDIREGKPKETLF
SKKYGVDLIRYTHGDTQTVVYSSNKLDDTIRYLSLTDNQYIRYFPGHTARVIALSMSPVD
DTFISGSLDKTIRIWDLRAPNCQGLTNPLGKPVCSFDPDGLIFAAGVESQAIKLYDLRAF
DKGPFASFETRFNRTCDLTGLKFSNDGKQILISTNGGLIRVLNAFNGTVLHTFSGYNNSK
GISLEACFTPDSQFVMIGSEDGRVHVWSTESGMKVAVLDGKHSGPINTLQFNPRYMTFAS
ACTNMLVLDSYREPAYSWDKDYDQFLLPLLTPQEPCYILYRLDTQNAQGHEWIFIAWSPD
QSPVRQKMVYAATRATLKKEFGGGHIKDEMFGTVEDDLCFQGYLRHMSSCFSPAPLTAAE
QELQRIKITEVKIKQEEAKRALQQLKLRRINYIQLRLDVEKETIELVHTKPTETHELPYR
IPMDSPRYHFFIYKHSHQGQRQEALVFIYSMPGYTCSIKERMLYSSCKNRLLDEVEKDYQ
LEVTKKMEIDNGDGLTEDFLYEEVHPMEHALKQAFAKPRGPGGKRGNKRLIKGAGENGEE
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacagacagcgtgtttcggagtttcagggttgccagaacatttcgacaaaat
tcccaaaaagtcaactgtgtggacttcagtccaaacggtgaaaatgcaatatcaagcagc
gacgacgactgcattgtgttgtatgacatccgagaggggaaacctaaagagaccttgttc
agcaagaagtatggagtagatctgatccgctacacacatggagatacacagacagtggtc
tacagctccaacaagctagacgataccatccgatacctgtcacttactgacaaccagtac
atcagatatttccctggtcacactgcaagggttatagctctgtccatgtcaccagttgac
gatacatttatctcgggctctttggacaaaacaatccggatctgggatctgcgcgctcca
aactgtcaaggtttgactaatccactggggaaacctgtttgttcatttgaccctgatggg
ctgatatttgctgcaggagtggaatcacaggccatcaaactatacgacctccgtgctttt
gacaagggtccctttgcctcctttgagacaaggtttaatcgcacctgtgacttgactgga
ctcaaattcagtaacgatgggaaacagattctcatctcaacaaacggaggcttaattcgt
gttctaaatgctttcaatggaactgtgctgcatactttttctggctacaacaacagtaaa
ggcatctccctggaggcctgcttcactcctgactctcagtttgtcatgatcggctcagag
gatgggagagtccatgtctggagcactgagagcgggatgaaggtggccgtgctggacggg
aaacactcaggaccgatcaacaccctacagttcaaccccagatacatgacttttgccagc
gcctgcactaacatgttggtgttagattcatacagagagccagcatacagctgggacaag
gattacgaccagttcctgctccctctgctcacgcctcaggaaccctgctacatcctctat
cgtctggacacccaaaatgcacaggggcacgagtggatcttcattgcctggtcacctgac
caatctccagtgaggcagaagatggtgtatgcagcgacccgtgccaccctgaagaaagag
ttcggaggaggtcacattaaagatgaaatgtttggcacggtggaggacgacctgtgcttc
cagggatacttgcgacacatgtcctcctgcttttccccagccccgctcacagcagccgag
caggaattacaacgaatcaaaatcacagaggtcaagatcaaacaagaagaggccaagcga
gctctgcagcaactcaagctgagacgcatcaactacatacagctgaggctggatgtagag
aaagagaccattgaattggttcacaccaaacctacagagacccatgagcttccctacagg
attcccatggattctcccagataccacttcttcatctacaaacattcccaccagggccaa
cggcaggaggcgctcgtgttcatatattcgatgcccggttacacctgtagcatcaaggag
cggatgttgtattcaagctgtaagaaccgactactggacgaagtggagaaagactatcag
ctggaggtcaccaaaaagatggagatagacaatggcgatggcctgacagaagacttcctg
tacgaggaggtgcaccctatggagcacgccttgaagcaggcctttgccaagccccgcgga
ccgggggggaagaggggcaacaaacgcctcatcaagggtgctggggaaaatggggaagaa
agttag
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