Eleginops maclovinus (Patagonian blennie): 134882765
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Entry
134882765 CDS
T09869
Name
(RefSeq) ATP-dependent RNA helicase DDX19B-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03013
Nucleocytoplasmic transport
emac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134882765
03015 mRNA surveillance pathway
134882765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134882765
Enzymes [BR:
emac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134882765
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
134882765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
DUF2999
Motif
Other DBs
NCBI-GeneID:
134882765
NCBI-ProteinID:
XP_063766755
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All DBs
Position
20:20904132..20910392
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AA seq
488 aa
AA seq
DB search
MATESWAEAVDEQEAAAESIGGLTLKEKPEENGTAALATDSSSAAAKSEVQGENKPADED
DKDDKAAQSLLNKLIRNNLVSNTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNRFPQCLCVSPT
YELALQTGKVIEQMGKHYNEVKLVYAIRGNKLPRGTMLQEQIVIGTPGTMLDWCGKFKFI
DPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQRIVPE
PNIIKLKREEETLDTIKQYYVLCNCREEKFHALCNIYGAITIAQAMVFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIDRFREGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFSKKIEKLNTDDL
DEIEKISS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctacggagtcttgggcagaggcggtggacgagcaagaagccgcggcggaatcgatc
ggtggcctcacattaaaagagaaaccagaggaaaatggcacggcagcattagcaacagac
tccagcagtgcagctgcaaagtcagaagtgcagggagaaaacaagcctgcagatgaagac
gacaaagatgacaaggcggcgcagtcgttattgaacaagttaattagaaataatctagta
agtaacacaaatcaagtggaagttcttcagaaggatccaaactctccgctctactctgtc
aagtcttttgaggagttgcgactcaaaccacagctgcttcagggcgtgtacggcatggga
ttcaaccggccatccaaaatccaggagactgccttacctatgatgctggccgaacctcca
cagaacctgattgcccagtctcagtcgggaacagggaaaacagctgcatttgtcctggcc
atgctcagtcatgtcgatcccaacaacagatttccccagtgcctgtgtgtgtcacctacc
tatgaactggcacttcagactggcaaggtaatcgagcagatgggcaaacactacaatgag
gtcaaacttgtctacgccatcagaggaaacaaattgccacggggcacaatgctgcaggaa
cagattgttattggcacgcctggtaccatgctggactggtgcggtaaattcaagttcata
gacccaaagaagatcaaggtgtttgtgcttgacgaggccgacgtcatgatcgccacgcag
ggtcaccaggaccagagcatccgcatccagaggatgctgcctaaaaactgccagatgttg
ctgttctccgcaacgtttgaagagacagtgtggaacttcgcccagcgcatcgtgcctgaa
cccaacatcatcaagttgaagagagaggaggagacgctggataccatcaaacagtactat
gtgctgtgcaactgcagagaggagaagttccacgcactctgtaacatctacggagccatc
accatcgcccaggccatggtcttctgccatacaaggaagactgcaggctggctggcaggc
gagctgtccagagaaggccaccaggtggcgctgctcagtggagagatgcaggtggagcag
agggctgctgtcatcgaccgcttcagagaaggaaaggagaaagtcctggtcactacaaac
gtctgtgcccgaggaatcgacgtcgagcaggtttctgtggtgatcaacttcgaccttcct
gtagacaaggatggtaacccggacaacgagacatacctgcacaggattggccgcacaggt
cgatttggcaaaagaggattggccatcaacatggtggacagcaaaatgagtatgaacatc
ctcaacaggatccaggagcatttcagtaagaaaatcgagaaactaaacacggatgatttg
gatgaaattgagaaaatctccagctaa
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