Eleginops maclovinus (Patagonian blennie): 134883155
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Entry
134883155 CDS
T09869
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134883155 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emac03021
]
134883155 (smarcd1)
03036 Chromosome and associated proteins [BR:
emac03036
]
134883155 (smarcd1)
Transcription machinery [BR:
emac03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134883155 (smarcd1)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134883155 (smarcd1)
PBAF complex
134883155 (smarcd1)
GBAF(ncBAF) complex
134883155 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
134883155
NCBI-ProteinID:
XP_063767434
LinkDB
All DBs
Position
20:complement(10959814..10973202)
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AA seq
533 aa
AA seq
DB search
MAARGGFQSAPTGGVVGAMGPGPPVQGAGPGMGPGTPSGRMVPSSAQQNHMYRSPMPGPG
YPRPGMPPSNRMTPQGPAMGPPGYGNSPVSRPVMPGVMDPSRKRPAPQQIQQVQQQNRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQILIPERPTHPRIKKQN
GTEIFETQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKT
QMNSFLLSTASQQEIAGLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRD
LKTMTDVVGNPEEERRAEFYYQPWAQEAVCRYFYSKVQQRRQELETALGIRNT
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagtcggcaccgacgggtggtgttgttggagcaatggga
ccaggaccaccggtacaaggcgcaggaccaggcatgggccccgggactccttcgggacga
atggtaccgtcgtcagctcagcagaaccacatgtaccgctccccgatgccagggcctggg
tacccgagaccgggcatgcccccatccaatcgcatgaccccacaggggccggccatgggg
cccccaggatacggaaacagccctgtgtctcgccccgtgatgcctggcgtgatggacccc
tctcgcaagaggcccgcgccccaacagatccagcaggttcagcagcagaaccgcaaccag
cacacaaagaagaagaagatggctgataaaattctacctcagaggatcagggaactggtc
ccagagtctcaggcttacatggatctgctggctttcgagaggaagctggatcagaccatc
atgcggaagaggctggacattcaggaagccctgaagaggcccatcaagcaaaagagaaag
cttcggatcttcatatccaacaccttcaaccccgcaaagccagatgcagaggatggagaa
ggcaccgttgcatcatgggagctgcgtgttgaggggcgtctgctggaagatacggctgtg
tccaagtatgaagccaccaaacagaagaggaagttctcctctttcttcaagtctctggtg
attgagttggacaaagacctgtatggcccagataatcaccttgtggagtggcacaggact
gccaccacccaggagactgatggtttccaggtgaagagacctggtgacgtgggagtccgc
tgcaccgtcctgctgatgctggactaccagccccctcagttcaagctggacccccggctg
gctcgtatgctgggcatccacacccagaccagacctgtcatcatccaggctctgtggcag
tatgtcaagacccacaaactccaagaccctcatgagcgcgagttcatcaactgtgacaaa
tacttgcagcagattctaataccagagagaccaacacaccccaggataaaaaaacagaac
gggacagagatctttgagactcagcgaatgaagttctctgagatcccgcagcgcctgcat
gccctcctgatgcccccagagccaatcatcatcaaccatgtgatcagtgtggaccctaat
gaccaaaagaagactgcttgctacgacatagacgtggaggtggacgacacgctgaagacc
cagatgaactccttcctgctgtccacagccagtcagcaggaaatagcaggactggataac
aagatccatgaaaccatcgagaccataaaccagctgaagacccagagagagttcatgttg
agtttcgccagagatcctcagggctttatcaacgactggctgcagtcccagtgcagagac
ctcaagaccatgaccgatgtggtgggaaacccagaagaagagaggagagccgagttttac
taccagccgtgggctcaggaggcggtctgccgctatttctactccaaggtccagcagagg
aggcaggagctggagacggcgctcggcatcaggaacacctag
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