Eleginops maclovinus (Patagonian blennie): 134883200
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Entry
134883200 CDS
T09869
Symbol
pbrm1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134883200 (pbrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emac03021
]
134883200 (pbrm1)
03036 Chromosome and associated proteins [BR:
emac03036
]
134883200 (pbrm1)
Transcription machinery [BR:
emac03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134883200 (pbrm1)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
134883200 (pbrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134883200
NCBI-ProteinID:
XP_063767532
LinkDB
All DBs
Position
20:complement(15547523..15561868)
Genome browser
AA seq
1637 aa
AA seq
DB search
MALKRRRATSPSSSVSGGDFDDNQTSSLVSSIGRKRRRTSNIPTVDPIAVCHELYNTIRD
YKDDQGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVEQLTSDFQLL
FNNAKTYYKSDSPEYRAACKLWDLYLRTKNEFVQRGEYDDDDEDGYDAQDNPGGSTEDES
APTCLKEVLEQLLDAVVSYTEPTGRLVSELFQKLPSKMQYPDYYAIIKEPIDLKIVAQKI
QLNHYRSVSAMAKDIDLLVKNAKTYNEPGSQVFKDANTIKKVFAQKKSEVEHGEPIKSSI
RIRNRRSAQGDRLSAITMALQYESDEEGILSGSVHYDEGESEAESMTSNMDMSNPIFQLY
EAVRGARNSQGQLISEPFLQLPSRKDYPDYYLQINQPICLHLIKNKMKNNEYESVEHVDS
DLMRMFENAKRYNVPHSSIYKRALKLQHIQQMKRKELLRRDDDDGDSMLSSATSDTSSTK
RKSHKKNTKKNRMKALFSAVAEAREAGTGRRLCDLFMVKPSKKDYPDYYKVILEPMDLRT
IEHNIRSDKYMTEDAMVEEMKLMFRNARHYNEEGSRVYNDADVLEKIMKDRRKDLGPATD
DDDMISPKLKIRKNSITLKKSKYLTPLQQKLNELYEAVKNFTDKRGRRLSTIFLRLPSRA
ELPDYYIAIKKPVDMEKIKSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIYRDALM
LHRVLLVTRRDLEGGDDAHVPDVPRLIQELVRSLFVSVLGHQDDEGRCYSDSLAEIPAID
PANPEKPPLNFEIIRTNVDRGRYKRLDVFQDHMFEVLEKARRLNRTDSEIFEDAVELQQF
FIRIRDELCKNGEILMSPALSYTSKHLHSDVEKEKKEKLPKEFEEDKIKREEEKREAEKR
EDSVGGSWQSNLQRTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIIYIERLWQDDTGEK
WLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKAPVSKILGKCVVMFVKEYFKLHPEGF
RAEDVYVCESRYSAKSKSFKKIKMWTMPLSSVRFVPREVPLPVVRVASMFAPKQEEKQPE
VVDEIKMTDGLVDKEREDVPMDMTNGEPGCQYYEQLCYNNLWLKVGDCVYIGSHGLVRHR
VGRIEKMWMRDGAGYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCVIGKCVV
SSFKDYLSCRPTEVLEENVLLCESRYIESEKQMKKFKGLKRFSLSGKVVEDEIYYFRKLI
VPQKEPSPLLDKKIEELEAKFADMTDEELEDLGDDDGELGDQSHSRRHSSMSSDMDIMPY
TPPQSTPKSIKGLSKKEGSKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLVGTEWR
NLEGSKKAEYEERAAKVAEQQERDRAHHQTSPRAGTPVGALMGLVPPPIPMGMLNPSMTP
VSAMMGVYRSAMMPPQGYVEGMVSMTGMPPHHMGVPVFPQHLLPVMPGFPGMPCFGVNGI
GGGHGAGNSQGSQGSMGQGQQAPPPYPGQGQMGQPAHQQPSTPMFVSPPAKSQRLLHSEA
YLRYIEGLTAESSTISKWDQALSVQKQDVRLTKEQESRLPSHWLKSKGAHKTMADALWRL
RDLMLRDTLNIRQTHNL
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaaaaggagaagggcaacatccccctctagcagtgtgagtggaggagatttt
gacgataaccagacttcatcgttagtgtcttcaattgggagaaagaggagaaggacctca
aacattcctactgtggaccctattgctgtctgtcatgaactgtacaacacaatcagagat
tacaaggatgatcagggtaggatgttgtgtgagcttttcatcagagcacccaaacggagg
aatcaaccggactattatcatgttgtatctcagcctatcgacatgatgaagatccagcag
aaattaaagatggaggagtatgatgatgttgaacaactcactagtgactttcaactgttg
ttcaacaatgcaaaaacatactataagtcggacagtcctgagtacagagcagcctgtaaa
ctttgggacctttacctgagaaccaagaatgaatttgttcagcggggcgaatatgatgat
gatgatgaagacgggtacgatgcacaagacaaccccggaggctccactgaggatgagagt
gcacccacctgcttgaaagaagtcctcgagcagctccttgatgccgtggtgtcttacact
gagcccacaggccgtctggtcagcgagctttttcagaagctaccctccaaaatgcaatac
ccagattattatgccatcattaaggaaccaatagatctgaaaattgtggctcaaaagatc
cagttaaatcactacaggagcgttagtgccatggctaaagatatagatttgctggtcaag
aatgccaagacgtataatgagcctggatcgcaagtgtttaaggatgcaaataccatcaaa
aaggtttttgcacaaaagaagtctgaggtggagcatggagagccaatcaagtccagcatt
cgtatcaggaatagaaggtctgctcagggggaccgcctctcagctatcaccatggctctt
cagtatgaaagtgatgaggaaggcattctctccgggtctgtccactatgatgagggtgaa
tctgaagcagagagtatgacctctaacatggacatgagtaatcccatcttccagctgtat
gaggcggtgcgaggggccaggaacagccagggccagctgatctctgagcctttcctgcag
ctgccctccaggaaggactaccccgactactatctccagatcaatcagcccatctgcctc
catttgatcaagaacaagatgaagaacaatgaatatgagagcgtggagcatgtcgactct
gatctgatgcggatgtttgagaatgccaaacgctacaatgttcctcactcctcaatctac
aagcgtgcactcaaactccaacacattcagcagatgaagaggaaagagctcttacggaga
gatgatgatgatggagacagcatgctctcctctgcaacgtctgacaccagcagcacaaaa
agaaaaagtcacaagaagaatacgaagaaaaaccgaatgaaagctcttttttccgccgtg
gctgaggcacgagaagctggcactggtcggaggctttgtgacctcttcatggtcaagccc
tcgaaaaaggactatcccgactactacaaggtcatcctggaaccgatggacctcaggacc
attgaacacaacatccgctcagacaagtacatgactgaagatgcaatggtggaggaaatg
aagctgatgttccgcaatgctcgacactacaatgaagaaggctctcgggtctacaacgat
gctgacgtcctagagaagattatgaaagacagacgcaaggatcttgggccagcaacagat
gatgatgacatgatatctccaaagttgaaaataagaaagaacagcattactttgaagaag
tccaagtacttaacacccttgcagcagaagctgaatgagctctatgaggctgtcaagaac
ttcacagataagcggggccgtcgcctcagcacaatattcctgcggttgccgtctcgggcc
gagctgcctgactactacatcgctatcaagaaacctgttgacatggagaagatcaaaagc
cacatgttggctaacaagtaccaggatgtggatgcactggtggaggacttggtgctcatg
ttcaacaatgcctgtacttacaacgagcccgagtctctgatttaccgagacgctctcatg
ctgcacagggtgctactggtgaccaggcgtgacctggagggaggagatgacgcccatgtg
ccggatgtaccacggcttattcaggaacttgtccgcagcctctttgtttccgtgctcggt
caccaagatgacgagggccgctgctacagcgattcacttgcagagatacctgccatagat
cccgcaaatcctgagaagccacctctgaactttgagattatcaggaccaatgtagatcga
gggcgttataagagactggatgtgtttcaggaccacatgtttgaagtgctggaaaaggcc
agacgcttgaataggacagattccgagatcttcgaggacgctgtggaactgcagcagttc
ttcatccggatcagagatgagctgtgtaagaacggagagatcttgatgtctcctgctctc
agctacacctccaaacatctgcatagtgatgtggaaaaggaaaagaaagaaaagctcccc
aaggagtttgaggaggacaaaatcaagcgggaagaggaaaaaagggaagctgagaagaga
gaggactcagttggaggatcatggcagtctaacctgcagcgcacatacagtcaggactgc
agcttcaaagacagcatgtaccacgtgggagactatgtgtatgtggagcctgcagagcca
aacctccagcctcatatcatctacattgaacgcttgtggcaagatgacactggtgagaag
tggctctatggctgctggttttacaggccaaacgaaacgttccatctggccacaaggaag
ttcttggagaaggaggtttttaaaagcgactattacaacaaagctcctgtcagcaagatt
ctgggcaaatgtgtggtcatgtttgtgaaggaatacttcaaacttcatccagaaggcttc
agagctgaggatgtttatgtctgtgagtcgcgctactctgccaagtccaagtccttcaag
aagatcaagatgtggaccatgcccctgagctcagttcggtttgttcccagagaggttccc
ctacctgtcgtccgtgtagcctccatgtttgctcccaaacaagaggagaaacaacctgag
gtggtggatgaaatcaaaatgacagatggtcttgtagacaaggagagggaggatgtcccc
atggatatgaccaatggggagccgggttgtcagtactacgagcagctctgctacaacaac
ctgtggctgaaagtaggagactgtgtttatattggttcacatggactagtgcgccaccga
gtgggcaggattgagaaaatgtggatgcgagacggagcaggctacttctttggtccaatc
ttcatccatccagaggaaacagagcacgagcccactaaaatgttctacaagaaggaagtg
ttccttagcaaccttgaggagacttgccctatgacctgcgtcatagggaagtgtgtggtg
tcgtccttcaaagactacctttcctgtcggccaactgaagtgcttgaggagaacgtactg
ctctgtgagagccgctacatcgagagtgagaagcagatgaagaagttcaagggcctgaag
cgcttctcactctctgggaaagtggttgaggatgaaatctactattttaggaagctcata
gtgcctcagaaggagccctcccctctgctggacaaaaaaattgaggaactggaggccaag
tttgctgatatgacagatgaggagctagaggatcttggggatgatgatggcgaactaggg
gaccagtctcactctcggaggcactcttccatgtctagtgacatggatatcatgccctac
actccgccgcagtccacaccaaaatccataaagggcctttcaaagaaggagggctctaag
cggaagatcaatatgagtggctacatcctgttcagcagtgagatgcgggcggtcatcaaa
gcccagcacccagacttctcctttggggagctcagccgcctcgttggcacagagtggaga
aacctagagggttccaagaaagcagaatatgaagagcgagcagctaaagtagcagagcag
caggagcgtgacagggcccatcaccagacgtcgcctagagcaggtaccccagtaggggca
ctgatggggctggtccctcccccaatccccatggggatgctaaatcccagcatgacgcct
gtgtcagctatgatgggtgtatatcggtcagctatgatgcccccgcagggatacgttgaa
ggcatggttagtatgactggcatgccaccacatcacatgggggtgcctgtctttccccaa
catctcctgcctgttatgcctgggtttcctggaatgccttgctttggtgtcaatggcata
ggaggtggtcatggagcaggaaacagccaaggatctcagggttcgatgggccaagggcag
caggctcccccaccttacccaggacaaggccagatgggacagcctgcgcaccagcagccc
tcgacccccatgttcgtgtccccaccagccaaatctcagcggctgctccactctgaggca
tacctcagatacatcgagggccttactgcagagtcttctaccatcagcaagtgggaccaa
gctctttcagttcaaaaacaagatgtgcgtctcactaaagagcaggagagcagactacca
tcccactggctaaagagtaagggggcccacaagacaatggcagatgcactttggcgactc
cgtgacctgatgctgcgagacaccttaaacatacgccagacgcacaacctgtag
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integrated database retrieval system
