Eleginops maclovinus (Patagonian blennie): 134883355
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Entry
134883355 CDS
T09869
Symbol
pdzrn3b
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emac04121
]
134883355 (pdzrn3b)
Enzymes [BR:
emac01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134883355 (pdzrn3b)
Ubiquitin system [BR:
emac04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
134883355 (pdzrn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Prok-RING_4
PDZ_Tricorn
Sina_ZnF
U-box
zf-rbx1
zf-TRAF
TRAF3_RING
zf-RING_6
RING_XB3-XBAT31
TRAF2_zf
IBR_1
Motif
Other DBs
NCBI-GeneID:
134883355
NCBI-ProteinID:
XP_063767750
LinkDB
All DBs
Position
20:complement(26677485..26770787)
Genome browser
AA seq
1045 aa
AA seq
DB search
MGFELDRFKGTVDPDFKCNLCNKVLEDPLTTPCGHVFCSGCVLPWVVKQSSCPVKCQRIS
TKELNHVLPLKNLILKLEIKCDNHERGCDAVVKLQHLAEHTEMCDYTPAKCRNKGCTEVL
NLGDMDAHMRETCDCRPVGLCESGCGLMLSHREQRLKSHCCLRSLKAHNSALQCKVIILD
REFKQQTIKANKREKALLAQLSDVHSELQMTALKYQKKFTEYSERIDSLTKTVAFSCKEG
ETKSVTVVLLREGGSLGFNIIGGRPCADDNDSTSNEGIFVSKIIEEGAADKEEGLQIHDR
IIEVNGKDVSKATHDQAVEAFRAAKDPIMVQVLRRSPHPKVSGQAGDSQVSDNSTQTDIT
LQHIMALTKLSPSSPPMTELEEYLLPEEHPQHAYFDPNDFLEVIQQDIEREELEYEEVDL
YRANIQEKLGLTICYRTDDEDEAGIYISEIDPHSIAAKDGRIREGDKIIQINGVEIQNRE
DAVVLLTSEGNQNITLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEQQHHQAMQFTASM
LQQKKHEEDGGTTDTATLLSNHHEKDSGVGRTDESTRNDESSEQENLGDDHTTASNTLGS
CRKLTYSQDTLGSTDLPFSGESFISADYHDADFLGIPADECERFRELLELKCQMRNSGAQ
GLYYQGGQDQDGVDKELEMLNEELRTIELECLNIVRAHKMQQLREQCRESWMLHDSGFRN
YNTSIDARRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLRRCAENQGP
AGASSSTSSNDRVVKPLQSPVQEASGPSRSKGSSKDPDAALQAESKERKSEESSKSGRSC
HQPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCRDPISPGDLDPKMEW
KVKIRSDGTRYITKRPVRDKLLRERALRIHEERSGMTTDDDAISELKMGRYWSKEERKQH
AVRSKEQRQRREFMKQSRADCLKGESGAEDKKEPNIIELSHKKMMKKRNKKIFDNWMTIQ
ELLTHGTKSPDGTRVYNSILSVTTV
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagctggaccgcttcaagggcaccgtggacccggattttaaatgcaacttg
tgcaacaaagtgctggaggacccgctgacgactccgtgcggtcacgtcttctgctcaggc
tgcgtgctgccctgggtcgtcaagcagagcagctgcccagtcaaatgtcagcggatctcc
accaaagagctgaaccacgtcctgcccctgaaaaacctaatcctgaagctggagatcaaa
tgtgacaaccacgagaggggttgcgatgccgtggtgaagctgcagcatctggccgagcac
accgagatgtgcgactacaccccggccaagtgcaggaataaaggatgcacggaggtcctc
aacctcggggacatggatgctcacatgcgggagacgtgtgactgcagaccggtggggtta
tgcgagagcggctgcggcttgatgctctctcacagagagcagagattaaagagccactgc
tgcctgagatccctgaaggcgcacaacagcgcactgcaatgcaaagtcatcatcctggat
agagagttcaagcagcagactattaaagccaacaagagggaaaaggcactgctggctcaa
ctttccgacgtgcacagcgagctgcagatgacagcactgaaatatcagaagaaattcacc
gagtacagcgagaggatcgattccctcaccaagaccgtggctttctcttgcaaggaaggc
gagactaaaagcgtgacggttgtccttctacgtgagggcggatctctgggttttaacatc
ataggaggaaggccatgcgcggacgacaatgacagcacttcgaatgaagggatctttgta
tccaagatcatcgaggaaggagcggcagacaaggaagaaggccttcaaatccacgacaga
ataatagaggtcaatggcaaggacgtctccaaggccacccacgatcaggcggtggaggcc
ttccgcgccgccaaggatcccatcatggtgcaggttctgcgccgatccccgcatcccaaa
gtgtccggccaggcgggcgactcccaggtgtccgacaacagcacccagacggacatcacc
ctgcagcacatcatggcccttacgaagctgtctccttcttcaccccccatgacggagctg
gaggagtatctgctaccagaggagcatcctcaacacgcatacttcgaccccaacgacttc
ctggaggtcatacagcaggacatagagcgcgaggagctggaatacgaggaagtggatttg
taccgagccaatatccaagaaaagctgggtctgacaatctgttacaggactgatgatgag
gacgaagctgggatttacattagtgagattgatccgcacagcattgctgcaaaggacggc
agaattagagaaggcgacaaaatcattcagatcaatggtgtagagatccagaaccgggag
gatgctgtagtgctgctgaccagtgaggggaaccagaacatcactctgctggtggcccga
ccggagatccagctggacgagggttggatggatgatgataggaacgacttcctggatgac
ctccacatggacatgctggagcagcagcaccatcaggccatgcagttcaccgccagcatg
ctgcagcagaagaagcatgaggaggacggaggcaccacagacacggccacgctgctgtcc
aaccaccacgagaaggacagcggggtcggtcgcacggacgagagcacgagaaacgacgag
agctcggagcaggaaaacctcggcgacgaccacaccacggcctccaatacgctgggcagc
tgcaggaagctcacctacagccaggacacgctcggcagcaccgacctgcccttcagcggc
gagtcgttcatctccgcggactaccacgacgccgacttcctgggtatcccggcggacgag
tgcgagcgcttcagggaactccttgagctgaagtgccagatgaggaacagcggagcccag
ggactgtactaccagggcggtcaggaccaggacggtgtggacaaagagctggagatgctc
aacgaggagctgcgcaccatcgagctggagtgcctgaacattgtccgcgctcacaagatg
cagcagctgagggagcagtgccgcgagtcctggatgctccacgacagcggcttccgcaac
tacaacaccagcatcgacgcgcgccgccacgagctctcagacatcacggagctcccggaa
aaatctgacaaagatagctccagcgcctacaacaccggcgagagctgccgcagcaccccg
ctcacgttggagctttctccagacaactctctcagaagatgcgcagaaaatcagggtccg
gctggggcgtccagctccaccagctccaatgatagggtcgtcaaaccccttcagtcccca
gtgcaggaagcctctggccccagcagaagcaaaggctcctcaaaagatccagatgcagcc
ctgcaggccgagagcaaggagaggaagtcggaagagtccagtaaatccggacggagctgc
catcagccacattcgccgtacaagcacgcccacatccctgcgcacgcccagcactaccag
agctacatgcagctgatccagcagaaatcagccgtggagtacgcccagagccagatgagt
ttggtcagcatgtgccgggaccccatcagccccggcgacctggatccaaagatggagtgg
aaggtgaagatccgcagcgacggtacgcgctacatcactaagaggccggtccgcgacaag
ctgctgagggagcgagcgctgcgcatccacgaggagcgaagcggcatgaccacggacgac
gacgccataagcgagctgaagatgggccgctactggagcaaggaggagaggaagcagcac
gcggtccgctccaaagagcagaggcagcgccgtgagttcatgaagcagagccgagcagat
tgtctgaaaggggagtccggagccgaggacaaaaaggagcccaacatcatcgaactcagc
cacaaaaagatgatgaaaaagaggaataagaaaatatttgacaactggatgaccatccaa
gaactgctgacccacggtaccaagtcaccagatggcacaagggtttacaactcgattctg
tctgtgaccacagtctaa
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integrated database retrieval system
