Echinicola marina: KZP23_01360
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Entry
KZP23_01360 CDS
T08295
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
emai
Echinicola marina
Pathway
emai03420
Nucleotide excision repair
emai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KZP23_01360
03430 Mismatch repair
KZP23_01360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emai03400
]
KZP23_01360
Enzymes [BR:
emai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KZP23_01360
DNA repair and recombination proteins [BR:
emai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KZP23_01360
MMR (mismatch excision repair)
Other MMR factors
KZP23_01360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
CowN
DEAD
AAA_22
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
UCS93714
LinkDB
All DBs
Position
272605..274872
Genome browser
AA seq
755 aa
AA seq
DB search
MDYLEGLNPPQRQAVEHTEGPLMIIAGAGSGKTRVLTYRIAHLIHAKGVDPFQILSLTFT
NKAASEMRNRIEKLIGLEARNTWMGTFHSIFAKILRVESEKLGFPSNFTIYDTDDSKSLI
KTIVKEMKLDDKVYKPNTVLSRISGAKNRLISWENYLNDPYIKADDETAMKPRMGEIYRA
YQKRLFKSSAMDFDDLLFNTNVLFRDHPDVLNKYQQRFRYVLVDEFQDTNLSQYLITKKL
AAVHQNICVVGDDAQSIYAFRGADIQNILNFEKDYPDLEVVKLEQNYRSTKNIVEAANSI
IAKNKAQLKKNVWTQNNSGDLIELIKSASDNEEGRMVASTIFEEKNNKKLQNSDFAILYR
TNSQSRAIEEALRKMNITYKIVGGLSFYQRKEIKDLMAYLRYVVNLDDEEAFKRIINYPK
RGIGASSVEKMLVAAYEHDIPLWQVVDNSNSFLGGRAANSVSDFATMIKSFRMECERKDA
YEAASSIAKQSGLLRELYEDKTIEGLNRYENVQELLNAIKEYVDNKDNEDKSLGAFLQEI
ALLTDNDRDKDDTDAVTLMTIHSSKGLEFRQVFVVGMEEDLFPSQMMMQSREDLEEERRL
FYVASTRAMEKLYLSYAITRYRFGRLLNCEPSRFLEEVDPNCMKVTKRKGMQMGHSFRDQ
AASNSEGKSGFIGIKPRPTVRANTTAKIHTPSPDFKPSNTNNLASGMKVEHPKFGYGKVL
KVEVEGMNKKATIGFDNFGDKTLLLSFAKLRIVES
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggattatttagaaggattaaatcccccacagagacaagccgtagaacatacagaagga
ccattgatgatcattgcgggtgcaggctcgggcaaaaccagggtactcacctacaggatt
gcccacttgatacacgccaaaggagtggatcccttccagattctctcactgacttttacc
aataaggccgccagtgagatgagaaacaggatagaaaagcttattgggctggaagccaga
aacacatggatggggacctttcactccatcttcgcaaaaatcctaagggtagaatccgaa
aaattgggcttcccctccaacttcaccatttacgatactgacgatagtaaatccttgatc
aaaaccattgtcaaggaaatgaaactagacgataaggtctacaagcctaatactgtatta
tcaaggatttcaggggcgaaaaaccggttaatctcttgggaaaactaccttaacgacccc
tatatcaaagcagacgatgaaacggccatgaagcccagaatgggcgaaatctatagggcc
tatcaaaaaagattgttcaaatcctctgcaatggattttgatgatctattatttaacacc
aatgtacttttccgcgatcatcctgatgtgctcaacaaataccagcaaagattcagatat
gttctcgtagatgagtttcaggacaccaatttatcccagtacctgatcaccaaaaaactg
gctgcagtacaccaaaatatttgcgtggtaggtgatgacgcccaaagtatttatgctttc
cggggtgcggatattcaaaatatcctgaatttcgaaaaagactaccctgatctggaagta
gtaaaactagagcaaaactatagatcaacgaagaatattgttgaagcggccaattccatc
attgccaaaaacaaagcgcaattaaagaaaaatgtctggacccaaaataatagtggagac
cttatagaacttataaaatctgcctcggacaatgaagaaggtagaatggtggcttccact
atcttcgaggagaagaacaataaaaagcttcaaaacagtgatttcgccattctctataga
accaattcccaatcaagggcgatagaggaggctttgagaaaaatgaatatcacctacaag
attgtaggtggtctttcattctaccaaagaaaggaaatcaaggacttaatggcttacctt
cgctatgtggtcaatcttgatgatgaagaagctttcaaacgcatcatcaattatcctaaa
agaggcataggtgccagcagtgtggaaaaaatgctggttgctgcatatgagcacgacatc
cctctatggcaggtggtggacaattccaattccttcttaggcggcagggcggccaactcc
gtatcagactttgccacaatgatcaaaagcttccggatggaatgcgaacgaaaagacgct
tatgaagctgcttcctccattgcaaaacaatctggcctactaagagaactctatgaagac
aaaaccatagagggactaaacaggtacgaaaacgtacaggaattgctcaatgccatcaag
gaatatgttgacaacaaagacaatgaagacaaaagccttggtgcctttttacaggaaatt
gccttgcttacggataatgacagagacaaggatgataccgatgcagtaaccttgatgacc
attcactcttccaagggattggaattccgtcaggtttttgtggtaggaatggaagaggac
ctgttcccttcccaaatgatgatgcaaagcagagaggacctggaagaagaaagaaggcta
ttctatgtcgcctctaccagggccatggaaaagttatacttaagttatgccatcacccgt
tatagattcggaagattgttaaactgcgaacccagccgttttcttgaagaggttgaccca
aattgtatgaaggtcaccaaaagaaagggaatgcaaatgggccattccttcagggaccaa
gcagcaagcaacagtgaaggtaaatccggatttatcggtataaaaccacgccccacggtc
agggccaatactaccgctaaaatccatacaccaagtcctgacttcaaaccatccaatacc
aacaatttggcctcaggcatgaaagttgagcatcccaagttcggttatggcaaggtttta
aaagtagaagtggaaggtatgaataaaaaagccactataggcttcgacaattttggagat
aaaactttattacttagctttgctaagcttcgaattgtggaatcctag
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