Echinicola marina: KZP23_03185
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Entry
KZP23_03185 CDS
T08295
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
emai
Echinicola marina
Brite
KEGG Orthology (KO) [BR:
emai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emai03009
]
KZP23_03185 (rimO)
Enzymes [BR:
emai01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KZP23_03185 (rimO)
Ribosome biogenesis [BR:
emai03009
]
Prokaryotic type
ribosomal protein modification factors
KZP23_03185 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UCS94052
LinkDB
All DBs
Position
complement(769473..770786)
Genome browser
AA seq
437 aa
AA seq
DB search
MKARTLKKDKVNIITMGCSKNLVDSEVMLTQLKGNGIEVSHESQQEDNNIVIINTCGFID
NAKQESVDTILQYVDAKEKGLVEKVYVTGCLSQRYKDDLEKEIPQVDAFFGTRDLPALLK
KFKADYKHELVGERLLTHPSHYAYMKISEGCDRPCSFCAIPLMRGGHVSKPIEELVKEAE
HKAANGTRELLLIAQDSTYYGLDLYKKRRLADLMTSLADVNGIDWVRLHYAYPTGFPMDV
IDVMAEHPNICNYLDIPLQHGSSDVLKVMRRGTSREKQEDLIHAIREKIPGIAIRTTLIA
GHPGEGEKEYQEMVDFVQRMKFERLGVFTYSHEEDTHAFSMEDNIPQEEKQARANNLMEV
QEQISFDLNQEKVGKTFKVLVDKKENGYFVGRTEFDSVEVDNEVLIDASKHYCRIGDFVD
VKVNDAAEFDLYGDVVS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggcgagaacattaaaaaaagataaggtgaatatcatcaccatgggatgctccaaa
aacttggtggattcagaagtgatgcttacacagttgaaggggaatgggatagaggtatct
catgagtctcagcaagaagataataatattgttatcatcaatacctgcggctttatagat
aatgccaagcaggaatctgtagacaccatattgcaatatgtggatgccaaggaaaaaggc
ttggttgaaaaggtttatgttacgggctgtctttcccaaagatataaggatgatctggag
aaggaaattcctcaggtagatgctttctttggtaccagagatcttcctgcactattgaag
aagtttaaggcagattataaacatgagttagtcggagagcggttgttgacgcatccttcg
cattatgcctatatgaaaatctctgagggctgtgacaggccatgttcattctgtgccatt
cctctgatgcgtggaggacatgtttccaaaccaattgaggagttggtcaaagaagcggag
cataaggcggcaaatggtaccagggaattactgttgattgcacaagactccacttattat
ggtcttgatctttataaaaaacgacgattagctgatctgatgacgtccttagctgatgtc
aatggaattgattgggtaaggttacattatgcttatcctacgggctttcctatggatgtc
atagatgtaatggctgagcatcccaatatttgtaattacttggatatcccacttcaacat
ggttcaagcgatgtgttaaaggtgatgaggagaggtaccagtcgcgagaagcaggaagat
ttgatacatgccatcagggagaagattcctggaatagcgatcaggactacattgattgct
gggcatccaggtgaaggagaaaaggaataccaggagatggtggactttgtgcaaagaatg
aaatttgaaagattgggcgtgtttacttattcccatgaagaagatacccatgctttttcc
atggaggataatattccacaagaagaaaagcaggccagggccaacaatttgatggaggtt
caggagcagatttcctttgatcttaatcaagaaaaagtaggaaagacctttaaggtatta
gtggacaaaaaggaaaatgggtattttgtaggaagaacggaatttgactctgtggaggta
gacaatgaggtgcttatagacgcttcgaagcattattgtagaattggggactttgtagat
gttaaggtcaatgatgctgctgaatttgatctttatggagatgtagtttcctga
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