Echinicola marina: KZP23_05150
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Entry
KZP23_05150 CDS
T08295
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
emai
Echinicola marina
Brite
KEGG Orthology (KO) [BR:
emai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emai03019
]
KZP23_05150
03009 Ribosome biogenesis [BR:
emai03009
]
KZP23_05150
Messenger RNA biogenesis [BR:
emai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KZP23_05150
Ribosome biogenesis [BR:
emai03009
]
Prokaryotic type
rRNA processing factors
KZP23_05150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Relaxase_C
FliT
Anti-TRAP
DUF5351
Motif
Other DBs
NCBI-ProteinID:
UCS94415
LinkDB
All DBs
Position
complement(1246872..1248443)
Genome browser
AA seq
523 aa
AA seq
DB search
MSTELVIDSAQNSSRIALLKNKGLVELHADEENNQFKVGDMYLGTVRKIVNGLNAAFIDV
GYEKDAFLHYQDLGPKVKSLIKYTKQIRNNHSEHPTLKGFELEPEIEKLGKISQVLSKSN
QILVQVVKEPISTKGPRLSCELSLAGRYLVLVPFSNSVNVSKKIRKAEERRRLARLITSI
KPANFGVIIRTVAEGQSVTELDKDLRNLVNSWEDGMKKLMKAKSKDKVIGEMSMASSIIR
DLLNESFDAITVEDELVYDQIRSYIRSIAPEKEKIVKLYNGKAKLFESFGIEKQIKSLFG
QSVSLPHGGYLIIEHTEALHVIDVNSGNKSNQESDQETTALKTNLVAVKEIARQLRLRDM
GGIIVIDFIDMKKAENKRAVYDAMKAEMKDDRSKNTVLPLTKFGLMQITRQRVRPEVNIV
TKETCPACNGTGKIQASILVADKLERDLEYTAVHQNLANIKIGLHPYLHAYFTQGMISRR
VKWFFKYFKWVKLIKDSSLPVTEYKFLDETGEEIELTIKEGAE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacggaattagtaattgattctgctcaaaacagtagtcgaatagcccttttgaaa
aataaaggactggtagagcttcacgctgatgaggaaaataaccagttcaaagtgggggat
atgtacctgggcacggtccgcaaaatcgtcaatgggctcaatgcagcttttatcgatgtg
ggctatgaaaaagatgcatttttgcattatcaggacctcggaccaaaggtgaagagtctg
atcaaatataccaaacagatcagaaacaatcattccgagcatcccacgcttaaagggttt
gagctagaacctgagatagaaaagcttggaaaaatttcccaggtcctttctaaaagcaat
caaattttagttcaggttgtaaaggagcctatctctacgaaaggcccacgactatcctgt
gagctctccttagccggtcgttatttggtactggttcctttttccaattcagtcaatgtg
tctaaaaagatccgtaaggctgaggaaagaagaagactagccagactaatcacttccatc
aaacctgccaatttcggtgtcatcattagaacagttgccgaaggacagtccgttacagaa
ctggacaaggaccttaggaacttggtgaacagttgggaggatgggatgaagaagttgatg
aaagccaaaagtaaagacaaggtgataggagaaatgagtatggccagctctataataaga
gacctgctcaacgaatcattcgatgcaatcacggtagaggatgaattagtctatgatcag
attcggtcttatatcagatcgatcgcccctgaaaaggaaaaaattgttaagctttacaac
ggtaaagccaagctatttgaaagttttggaattgaaaagcagatcaagagtctgtttgga
caatcggtaagtcttccgcatggcggatatttaattattgaacataccgaggcgcttcat
gtcattgatgtgaacagcggtaataagtccaaccaagaaagcgaccaggaaacaacagca
ttaaaaaccaacctggtggctgtcaaagaaattgccagacagcttcgcctccgagatatg
ggagggattatcgtcattgacttcattgatatgaagaaggccgagaacaagagggccgtc
tatgacgcgatgaaagctgagatgaaggatgataggtccaagaatacagtattgccattg
actaagtttgggttaatgcagataaccaggcaaagagtaagacctgaagtaaatattgtg
accaaagagacctgtcctgcttgtaatgggacaggaaaaatccaagcctctattttggtg
gctgataagctggaaagagatcttgagtacactgctgtacatcaaaacttggccaatatt
aaaattggcttgcacccataccttcatgcttattttacccaagggatgatttccagaagg
gtaaagtggttttttaaatatttcaaatgggtaaaactgatcaaagattcttcattaccg
gtgacggagtataaattcctggatgaaacaggagaagaaattgaacttactattaaagaa
ggggctgaatag
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