Echinicola marina: KZP23_10095
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Entry
KZP23_10095 CDS
T08295
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
emai
Echinicola marina
Pathway
emai03030
DNA replication
emai03430
Mismatch repair
emai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
emai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KZP23_10095 (dnaE)
03430 Mismatch repair
KZP23_10095 (dnaE)
03440 Homologous recombination
KZP23_10095 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emai03032
]
KZP23_10095 (dnaE)
03400 DNA repair and recombination proteins [BR:
emai03400
]
KZP23_10095 (dnaE)
Enzymes [BR:
emai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KZP23_10095 (dnaE)
DNA replication proteins [BR:
emai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KZP23_10095 (dnaE)
DNA repair and recombination proteins [BR:
emai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KZP23_10095 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
UCS95329
LinkDB
All DBs
Position
complement(2399435..2403724)
Genome browser
AA seq
1429 aa
AA seq
DB search
MYIIFDTETTGLPRDYNAPITDLDNWPRLVQLAWQLHDEKGKLISNHNYIVKPEGFTIPY
NAEKVHGISTDRALKEGHDLKEVLEIFHKDVDKAEYLVGHNIGFDINVCGSEYLRADVPM
QLMEKKELDTKDISTEFCAIPGGRGGKFKWPTLTELHQKLFGVGFEDAHDAAYDVDATAK
CFFGLISAKVQPPEEGIAVEEVIYEAPKLDAANFAAAKDEQKQAAQDVFKQARKADIGDL
VDVPFSHLHVHTQYSILQATSEIPAMVARAKEFNMPAIAMTDHGNMMAAFHFVKEAMAND
IKPVVGCEFNICQNHQDKSKKDDGFQAVLLAKNKAGYHNLAKLASFAYTQGFYYVPRIDK
ELLVQYKGDIIASTGGLWGEIPFLILNVGETQAEEAFVWWKELFGDDFYVELNRHGVPEE
EKVNEVLLRFAKKYDVKYFAANNTYYNTKNDAKAHDILLCVKDGEKVDKPKKYIGKRGRE
FRYGFPNEEFYIKTPEEMKKLFADLPEAIECTNEIVEKIEVYKLAREVLLPKFNIPEQFQ
DPQDDEDGGKRGENAYLRHLTYEGAKKRYPEITDEIRERLDFELSIIANTGYPGYFLIVQ
DFTTAAREMGVSVGPGRGSAAGSAVAYCIGITNVDPIMYDLLFERFLNPDRVSLPDIDID
FDDHGRQKVIDYVIEKYGANQVAQIITYGTMAAKSAIRDTARALDLPLSDADRLAKLVPD
IKLKALFGLASDRAKLSDKLKGNAENIDKAYELINISKGADDLAKTINQAKVLEGSVRNT
GIHACGVIITPDDITNFVPVALAKDSDMYCTQFDNSVVESAGLLKMDFLGLKTLTLIKDA
VKIVKERHGIELDPENFPIDDAPTYELFQRGETVGIFQYESAGMQKYMRELKPTVFADLI
AMNALYRPGPLEYIPSFIRRKHGDEEISYDLDDMEEYLQETYGITVYQEQVMLLSQKLAG
FTKGEADVLRKAMGKKLKDVLDKMKPKFVNQAAEKGHDKTKLEKIWKDWEAFASYAFNKS
HSTCYAWVAYQTAYLKAHYPAEYMASVLSNNMNDITQVTFFMEECKRMGIEVLGPDVNES
KEGFTVNQEGQIRFGLAAIKGAGGAAVHSVIEEREENGHYKNIFDFTQRVNLRAVNKKTL
ESLAMAGGFDCFPDHHRRQYLEGPENDATLIEKAVKYAQKKAQEAESSQVSLFGGGSGME
VPMPSITPIEPFSQLQQLNIEKEVVGLYISGHPLDQFKVEFESFTNTPLSEFANTEALKS
KGENIKAAGVVTSFAHRTTKNGNPFGTLTLEDYNGGHTFFFFGDDYVKFKEYFMTGWFLY
VTGSIQGKRWNPEELEFKVGNIILLNEVRSKMVKGIRININLDDLTLDLMEKLESITTKY
KGEAKLHINVTDVKERIAVDLMSTKYTVDPSFEMIKELESIQELSYKII
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtatattatttttgataccgagaccacaggtttaccccgggactataacgcccccatc
actgatctggacaactggccaagactggtacagctggcctggcagttacatgatgaaaaa
gggaagctgatctccaaccataattacattgtaaaaccagaaggtttcactataccttac
aatgccgaaaaagtccatggaatttccacagaccgggctttgaaggaaggacatgacctc
aaggaggtacttgaaatcttccataaggatgtggacaaggccgaatacttggtaggtcat
aatatcggattcgatatcaatgtctgcggatcggaatacctccgtgctgatgtccccatg
cagcttatggagaaaaaggagctggataccaaggacatctccacagagttctgtgccata
cctggaggcaggggaggcaaattcaaatggccaacccttacggaattacaccaaaaactc
ttcggtgtaggattcgaggatgctcacgatgctgcctatgacgtagatgctacggccaaa
tgtttctttggactaataagtgcaaaagtacagccacctgaagagggcattgctgtagaa
gaggtcatttatgaagctccaaaactggatgctgctaactttgctgctgccaaggatgaa
caaaagcaggccgcacaggatgtattcaagcaagcccgtaaagccgatataggtgacttg
gtggatgtaccatttagccaccttcatgtgcacacgcaatattccatccttcaggccacc
tcagagattcctgccatggtggcccgtgcgaaggaattcaatatgccggcaatcgccatg
acagatcatggaaatatgatggctgccttccacttcgtaaaagaagccatggccaatgac
atcaaacctgtcgtaggctgtgagttcaatatatgccaaaaccatcaggacaaatccaaa
aaagatgatggctttcaggccgttctcttagcaaaaaacaaagccggataccataatttg
gccaaactggcctcttttgcctatacccaaggattttattatgtacccaggattgacaaa
gagcttttggtgcaatacaaaggtgatattattgcctccacaggtggtttatggggagaa
atacccttcctgatcctaaacgttggggagacccaggcagaagaagcctttgtatggtgg
aaggagctgtttggcgatgatttctatgtagaacttaaccgccacggtgtacctgaagaa
gaaaaggtcaatgaagtactattgcgctttgctaaaaaatatgatgtaaagtatttcgcc
gcaaacaacacttattataacacaaaaaacgatgccaaagcccatgatattcttctttgc
gtaaaagatggggaaaaggtagacaaacctaaaaagtacattgggaaaagaggccgggaa
ttccgctacggcttccccaatgaagagttttatatcaaaactcctgaagagatgaaaaag
ctcttcgcagaccttccagaagccattgaatgcaccaatgagatcgtagaaaagatcgaa
gtatataagctggccagagaggtactgctccccaaattcaatattcctgaacaattccag
gatccccaagatgatgaggatggaggcaaaagaggggaaaatgcgtatttacgccatctc
acttatgaaggtgcaaaaaaacgctatccggaaatcacggacgaaatccgggaaagactt
gactttgagctttccattattgctaacacaggttatcccggctatttccttatcgtacag
gatttcaccaccgcagccagggaaatgggcgtgtctgttggcccaggaaggggatctgcc
gccggttcagcagtagcctattgcatcgggattaccaatgtggaccccatcatgtacgat
ctcctttttgagagattccttaatccagaccgggtatcacttcccgatattgatattgac
tttgatgaccacggtcgtcaaaaagtaatcgattacgtaatcgaaaaatatggtgccaat
caggtcgcccagatcatcacttatggtaccatggctgctaaatctgccattcgcgatacc
gctagagcattggaccttcctctatctgatgcagatagattggccaaattggttccagac
atcaaactcaaagcattatttgggctggcaagcgaccgtgccaagctttcagataagcta
aaaggcaatgctgagaacatagacaaggcttatgagctcatcaatatatccaagggagct
gatgacctcgcgaaaaccatcaatcaggccaaggtcctggaaggatcagtaagaaacacg
ggaatccacgcctgtggggtaatcattaccccagacgatattaccaactttgtcccagta
gcattggccaaagactccgacatgtactgtacgcagtttgataactccgtggtagaaagt
gcaggcctgctaaaaatggacttcttgggactgaaaacccttaccctgatcaaagacgcc
gtaaagatcgtcaaggaaaggcatggcatagagctggatcctgaaaatttccccatcgat
gatgcccctacctatgaacttttccaaagaggtgaaacagtagggatattccaatatgaa
tccgctggtatgcagaaatacatgcgggaacttaagcctaccgtttttgccgatttgatt
gccatgaacgccctttatcgtccagggccattggagtacatcccaagttttattagaagg
aagcatggagatgaagagatttcctatgacttggatgatatggaggagtaccttcaggaa
acctacgggattaccgtctaccaggaacaggtaatgctcctttcccagaaattggcaggc
tttaccaaaggtgaggccgatgtcctccgtaaagcaatgggtaagaagctgaaggatgtc
ctggataagatgaaaccgaaatttgtcaatcaggcggcagaaaaagggcatgataaaact
aaactggaaaagatctggaaggactgggaagcctttgcttcttacgcctttaacaaatcc
cactccacttgttatgcctgggtagcctatcaaacagcctacctaaaagcccactaccct
gccgaatacatggcatcggtactgagcaataatatgaacgacatcacccaagtaaccttc
ttcatggaagaatgtaaacgaatgggaattgaagtactgggacctgatgtcaatgaatcc
aaagaaggctttacggtaaaccaggaaggccaaatccggtttggactggctgccatcaag
ggcgctggaggagccgccgtacattcggtcatagaggaaagggaagaaaatggccattat
aagaatatctttgattttacccagagagtcaacctgagggctgtcaacaagaaaacgttg
gaatccttggccatggccggtggatttgactgttttcctgaccaccatagaaggcagtac
ttggaaggtcctgaaaatgatgccaccctaatcgaaaaagcggtaaaatatgcccagaaa
aaggcccaagaagctgaaagctctcaggtatccctgtttggaggtggttctggcatggaa
gttcccatgcccagcattactcctatcgagccattcagccagcttcagcagctcaatatc
gaaaaagaagtggttgggctatatatttccggccacccattggaccagttcaaagtagaa
tttgaatcttttaccaatacccctctttcagaatttgccaatacagaggccttaaaatcc
aagggagaaaatattaaggcagcgggtgtggtaacatcctttgctcacagaaccaccaaa
aacggcaacccctttggcacactgactttagaggattataatggcggccacaccttcttt
ttctttggcgatgattacgtcaaattcaaagaatactttatgacgggttggttcctctat
gtcacaggaagtatacagggaaaacgttggaaccctgaggaactggaatttaaagtagga
aatattattttgctcaatgaagtcaggagcaagatggtaaaaggcatcaggatcaacatc
aacctcgatgaccttactttggatttgatggagaaactggaatccatcaccacaaaatac
aagggagaagccaaattacatatcaatgtgacagatgtaaaagaaaggatcgcagtggac
ctgatgtctaccaaatatacggttgatccttctttcgagatgatcaaagaactggaaagc
atacaagaactcagctacaaaatcatctaa
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