Echinicola marina: KZP23_20435
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Entry
KZP23_20435 CDS
T08295
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
emai
Echinicola marina
Pathway
emai02024
Quorum sensing
emai03060
Protein export
emai03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
emai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
KZP23_20435 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KZP23_20435 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KZP23_20435 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
emai02044
]
KZP23_20435 (ffh)
Enzymes [BR:
emai01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
KZP23_20435 (ffh)
Secretion system [BR:
emai02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
KZP23_20435 (ffh)
Eukaryotic Sec-SRP protein
KZP23_20435 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
nSTAND3
AAA_16
AAA_22
CbiA
Zeta_toxin
ParA
ATPase
AAA_30
APS_kinase
AAA_17
ATP_bind_1
KAP_NTPase
ArsA_ATPase
AAA_31
CLP1_P
AAA_18
AAA_33
NPHP3_N
KTI12
NTPase_1
AAA_23
cobW
MeaB
AAA_14
Fer4_NifH
ResIII
Thymidylate_kin
AAA_19
Helicase_RecD
YqeC
Radical_SAM
AAA_24
AAA_28
ATPase_2
MobB
NACHT
DO-GTPase1
SLFN-g3_helicase
MMR_HSR1
NB-ARC
T2SSE
FtsK_SpoIIIE
Pox_A32
PIF1
Lipoprotein_19
TsaE
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UCS93003
LinkDB
All DBs
Position
complement(5025678..5027018)
Genome browser
AA seq
446 aa
AA seq
DB search
MFDNLSYKLDKAFKTLKGTGKITEINVASTVKEIRRALIDADVNYKVAKEVTDTIKTEAL
GRDVLISVSPGQLLVKITQEELTKLMGGKKEDINLSGDPGVILISGLQGSGKTTFSGKLA
SHLKKQGRQVLLVACDIYRPAAIEQLKTLGEQIGVEVYAEPENKNALEIASKAIEYAKKN
GKKTVIVDTAGRLAVDEQMMNEISELKKHLNPAETLFVVDSMTGQDAVNTAKTFDERLDF
NGVVLTKLDGDTRGGAAISIRHVVDKPIKFISTGEKMENLDVFYPDRMAQRILGMGDVVS
LVERAQQSFDEDEAKRINAKIRKNQFNFDDFLSQLEQIKKMGNLKDLMGMIPGMGKAIKG
LDIDDDSFKPIEAIIRSMTPLERENPDVIDGGRRRRIAKGSGRSIQEVNNLMKQFSDMRK
LMKQMNKMGGAQRALGNLMPKAGGRR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatcttagttataaattagataaggcatttaagaccctcaaagggacgggt
aaaatcacagagatcaatgttgccagtacggttaaggagatcagaagagccttgattgat
gctgacgttaactataaagtggccaaggaagttaccgatactattaagacggaagcttta
ggtagggatgtgttgatctctgtttctcctgggcagttattggtgaaaatcactcaggaa
gagctgaccaaattgatgggcggcaaaaaggaggatatcaaccttagcggagatcctggt
gtgatattgatttctggtcttcaaggttctggtaaaaccactttttcggggaaattggcc
agtcaccttaagaagcaggggagacaggtgttattggtagcttgtgatatttaccgacca
gctgcgattgaacagttgaagactttgggtgagcagattggtgtggaggtctatgcggag
ccggaaaataaaaatgctttggagattgcttcaaaagccatcgaatatgccaagaaaaac
ggaaagaaaactgtaatcgttgatacagctggtcgtttggcagtggatgagcagatgatg
aatgaaatttccgaattgaagaaacatctaaaccctgctgaaaccttattcgtggtggac
tccatgacggggcaagatgctgtcaacacagctaagacctttgatgagcgattagacttc
aatggggtagtattgaccaaattggatggtgatacccgtggtggtgcggccatttctatc
cgtcacgtagtagataaaccaatcaaatttatctctacaggtgagaagatggaaaacctg
gacgttttctacccggatcgtatggcccagcgaatcttagggatgggagatgttgtttcc
ttggtggagcgtgctcagcagtcttttgatgaggatgaagccaaaaggatcaatgcgaaa
atccgtaagaatcagtttaactttgatgatttcctttcccaacttgagcaaatcaagaaa
atgggtaacttgaaagatttgatggggatgatccctgggatgggaaaagcgatcaaagga
ttggatattgatgatgattcattcaaaccaatagaagcgattataagaagtatgacacct
ttggagcgtgagaatcctgatgtgattgatggaggaagaaggagaagaattgccaagggt
agtggaaggtctatacaagaggtgaacaatttgatgaaacagttttctgatatgagaaaa
ctgatgaagcaaatgaacaaaatgggcggtgcccaacgtgccttgggaaatttgatgcca
aaagcaggagggagaaggtaa
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