Euzebyella marina: D1013_03550
Help
Entry
D1013_03550 CDS
T05677
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
emar
Euzebyella marina
Pathway
emar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
emar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D1013_03550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emar03021
]
D1013_03550
Transcription machinery [BR:
emar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D1013_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_Tnp_ISL3
GerE
HTH_23
Phage_antitermQ
FAM198
HTH_30
TssR_C
UPF0122
DUF1804
HTH_38
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AYN66522
UniProt:
A0A3G2L2P7
LinkDB
All DBs
Position
864545..865081
Genome browser
AA seq
178 aa
AA seq
DB search
MQKPPLTIEELELFFKSNHAFLCLVALSIVKDKDVAKDIVQDFFISYWERRKNVQFTVSF
KAYAVRAIKNLSLQHVQKVKKEQSLVNQLVANIKVDEEKPQKIGNKKRIQELIDRLPESR
RKIFISYVIYGQSYSEIAENNGVSVNTVKTQMKRAYRFLRSEANPDLLYFCLVMFEIF
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagccgcctttgaccatagaagagttagaattgttctttaagagcaatcacgct
tttttatgtttggtggctttatctattgtaaaggataaagatgtcgcaaaagatatcgtt
caagatttctttatttcttattgggaaagaagaaagaatgtacaatttaccgtttccttt
aaggcctacgcagtaagggctataaagaacctaagtcttcagcacgtacagaaagtaaaa
aaagaacagagtttggtaaaccaattggtggccaacataaaggtagatgaagaaaaacct
caaaaaatcggcaataagaaacgcatacaagaattgattgacagactacccgaaagtcgc
agaaagatttttatctcttacgtcatatatggtcagtcgtattctgaaattgccgaaaac
aacggagtttcagttaatacggttaaaactcagatgaagcgagcctatcgatttcttagg
tctgaagcgaacccagatttgctctatttctgtttggtaatgttcgaaatattctag
DBGET
integrated database retrieval system