KEGG   Euzebyella marina: D1013_03550
Entry
D1013_03550       CDS       T05677                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
emar  Euzebyella marina
Pathway
emar02020  Two-component system
Brite
KEGG Orthology (KO) [BR:emar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    D1013_03550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:emar03021]
    D1013_03550
Transcription machinery [BR:emar03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D1013_03550
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_Tnp_ISL3 GerE HTH_23 Phage_antitermQ FAM198 HTH_30 TssR_C UPF0122 DUF1804 HTH_38 HTH_24
Other DBs
NCBI-ProteinID: AYN66522
UniProt: A0A3G2L2P7
LinkDB
Position
864545..865081
AA seq 178 aa
MQKPPLTIEELELFFKSNHAFLCLVALSIVKDKDVAKDIVQDFFISYWERRKNVQFTVSF
KAYAVRAIKNLSLQHVQKVKKEQSLVNQLVANIKVDEEKPQKIGNKKRIQELIDRLPESR
RKIFISYVIYGQSYSEIAENNGVSVNTVKTQMKRAYRFLRSEANPDLLYFCLVMFEIF
NT seq 537 nt   +upstreamnt  +downstreamnt
atgcaaaagccgcctttgaccatagaagagttagaattgttctttaagagcaatcacgct
tttttatgtttggtggctttatctattgtaaaggataaagatgtcgcaaaagatatcgtt
caagatttctttatttcttattgggaaagaagaaagaatgtacaatttaccgtttccttt
aaggcctacgcagtaagggctataaagaacctaagtcttcagcacgtacagaaagtaaaa
aaagaacagagtttggtaaaccaattggtggccaacataaaggtagatgaagaaaaacct
caaaaaatcggcaataagaaacgcatacaagaattgattgacagactacccgaaagtcgc
agaaagatttttatctcttacgtcatatatggtcagtcgtattctgaaattgccgaaaac
aacggagtttcagttaatacggttaaaactcagatgaagcgagcctatcgatttcttagg
tctgaagcgaacccagatttgctctatttctgtttggtaatgttcgaaatattctag

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