Euzebyella marina: D1013_05860
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Entry
D1013_05860 CDS
T05677
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
emar
Euzebyella marina
Pathway
emar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1013_05860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emar03019
]
D1013_05860
03016 Transfer RNA biogenesis [BR:
emar03016
]
D1013_05860
Enzymes [BR:
emar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D1013_05860
Messenger RNA biogenesis [BR:
emar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D1013_05860
Transfer RNA biogenesis [BR:
emar03016
]
Prokaryotic type
tRNA degradation factors
D1013_05860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH_PARP14_8
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
AYN66929
UniProt:
A0A3G2L3V0
LinkDB
All DBs
Position
complement(1424170..1426395)
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AA seq
741 aa
AA seq
DB search
MIPKVFKEVIDLGDGREISIETGKLAKQAHGSVVVSSGKCMLLCTVVSNYKASDVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHSETQVMIQLMS
HDENVMPDAMAGLAASAAIQLSDFPFECPISEVRVGRVDGELIINPTLAQLENSDIDMVI
GASADSVMMVEGEMKEISEEEMTEAIKFAHEAIKVQCEAQVKLAEAFGKKETREYEPERE
DEDLAKKIHDLTYNKVYEIAKAGSAKHERSAAFEAIKDEVIESFSEEEQEEYNGLISKYF
YKAEKAAVRDLTLNEGLRLDGRKTDEIRPIWCEVDYLPSTHGSAIFTRGETQALATVTLG
TSRDANQIDMPSYEGEERFYLHYNFPPFSTGEARPIRGTSRREVGHGNLAQRALKGMVPE
DCPYTVRVVSEILESNGSSSMATVCSGTMALMDAGVQLKKPVSGIAMGLISDAETGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVKALKQARDGRLHILGKL
TETISTPNEDVKPHAPKMVTRIIPNEFIGALIGPGGKVIQELQKETNTTIVINEDPVTEE
GIVEILGTDQDGINAVLAKIDSLMFEPEVGSVYEVKVIKMLDFGAVVEYQEAPGNEVLLH
VSELAWERTENVSDVVNMGDVFDVKYMGIDSRTKKDRVSRKVLLPKPEGYKERPPRNNND
RNRGRDNKRGRDNRDRKPKND
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaagtatttaaagaggtcattgaccttggtgacggtagggaaatctctatc
gagaccggtaaattggctaaacaggcccacggttctgttgtagttagttccggcaaatgt
atgttgctatgtaccgtagtttccaattacaaggcttcggatgtagattttcttccttta
acggtagattatagagaaaaattcgcggctgccggccgttatcctggtggcttctttaaa
agagaggccaggccaagcgatggtgaagtattgaccatgcgtttagttgacagggttttg
cgcccattgttcccgaaagattatcattctgaaactcaggtgatgattcaattgatgtct
cacgatgagaatgttatgccagatgcaatggctggtttggcggcttctgcggccattcaa
ctatctgattttccttttgaatgccctatttctgaagtaagggtaggtagagtcgacgga
gagttgatcatcaaccctactttggcccaattagagaattcagacattgatatggtgatc
ggtgcttctgcagattctgtaatgatggtagaaggtgaaatgaaagagatttcagaagaa
gaaatgaccgaagccatcaaatttgcgcacgaggctatcaaagttcagtgcgaggcccaa
gtaaaattagccgaagccttcggaaagaaagaaacaagagaatacgaacctgaaagagaa
gatgaagatcttgccaagaaaattcatgaccttacctacaataaggtgtatgaaattgca
aaggcaggttctgccaaacacgaaagaagcgctgcttttgaagctataaaagacgaggtt
atcgaatcttttagcgaagaggagcaagaagagtataacggccttatctcaaaatatttt
tacaaagctgaaaaagctgctgttagagaccttacacttaatgaaggtttgcgtcttgac
ggtcgtaaaaccgatgagattcgtccgatttggtgcgaggtagattatttaccctctacc
catggctctgctatctttaccagaggtgagacacaggcattagctacggtaactctaggt
acatctagagatgccaaccaaatagacatgccttcttatgaaggagaagagcgtttttat
cttcactataacttccctcctttttctacaggagaagcaagacctatcagaggtacgtca
agaagggaagtcggtcacggaaacttggctcaaagagcattgaaaggtatggttcctgaa
gattgcccttacactgttagggtcgtttccgaaatattagaatcgaatggttcttcatca
atggctacggtttgttcaggcactatggcgttgatggatgccggggttcaacttaaaaag
cccgtttcaggtattgccatgggcttaatttcagatgccgaaacaggaaagtacgccgta
ctatctgatattcttggtgatgaagaccacttaggtgatatggactttaaggtaaccggt
actgccgatggtatcaccgcttgccaaatggacattaaggtcaagggattgtcatatgaa
attttggtaaaagcccttaaacaagcgagagatggtcgtttgcatatcttaggtaaactt
actgaaaccatttcaacgccaaatgaagatgtgaaacctcatgcaccaaaaatggtaacg
agaattattccgaatgaatttatcggagcattgatcggacctggcggaaaagtaattcaa
gaacttcagaaagagaccaatacaactatcgtgatcaatgaagatccggtaaccgaagaa
ggtatcgtagagattctaggcacagatcaagatggcatcaatgccgtattggccaaaata
gattcgttgatgttcgagcctgaagtaggcagtgtttatgaagtaaaggtcattaaaatg
ctagactttggtgccgtagtagaataccaagaggctccgggtaacgaagtacttcttcac
gtatcggaactagcttgggaacgtactgaaaacgtaagcgacgtggtcaacatgggtgat
gttttcgatgttaaatacatgggtatcgattctagaaccaaaaaagacagagtttcgaga
aaggtacttttaccaaaaccggaaggttataaagagagaccaccacgtaacaataacgac
cgtaatcgcggtagggataataaacgcggtagggataacagagacagaaaacctaaaaac
gactaa
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