Euzebyella marina: D1013_06745
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Entry
D1013_06745 CDS
T05677
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
emar
Euzebyella marina
Brite
KEGG Orthology (KO) [BR:
emar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emar03009
]
D1013_06745 (rimO)
Enzymes [BR:
emar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D1013_06745 (rimO)
Ribosome biogenesis [BR:
emar03009
]
Prokaryotic type
ribosomal protein modification factors
D1013_06745 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AYN67086
UniProt:
A0A3G2L4H6
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All DBs
Position
1645491..1646792
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AA seq
433 aa
AA seq
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MRTKSLKKNRINVVTLGCSKNLYDSEVLMGQLKANDKEVVHEEDGNVVVINTCGFIANAK
EESVNTILEYVQKKEAGEVDKVFVTGCLSERYKPDLQKEIPHVDEYFGTSELPNLLKALG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHKSKPIEELVTEAQKLA
AKGVQELILIAQDLTYYGLDLYKKRNLAELLEQLVKVEGIEWIRLHYAFPTGFPMDVLDV
MNREPKVCNYLDIPLQHISDAILKSMRRGTTQEKTTKLLKEFRAAVPNMTIRTTLIVGYP
GETEEDFEILKEWVKEMRFERLGCFTYSHEENTHAYSLEDDVPEEIKQQRANEIMEIQSQ
ISWELNQEKIGQTFRCMIDRKEGNYFIGRTEFDSPDVDNEVLIDATKHYLKQGEFAEIRI
FEAADFDLYGEPV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatcccttaaaaagaatcgtatcaacgtggtaaccttgggttgctctaag
aacctttacgactcagaggtcttaatgggtcaattgaaggccaatgacaaagaagtcgtg
catgaggaagatggcaatgtggtcgttatcaatacttgcggttttattgccaatgccaaa
gaggaaagtgtcaatacgattcttgagtacgtacagaagaaagaggcgggcgaggtcgac
aaagtgttcgttaccggttgcttgagcgaacgttataagccagacctacaaaaagagata
ccgcatgtcgatgagtatttcggcactagtgaattacctaatcttttaaaggctttaggg
gccgattacaagcatgaattgataggggagcggttgacgacaacaccgaagaactatgct
taccttaaaattgccgagggttgcgatcgaccttgttctttttgtgccatacctctaatg
cgtggtaagcataagagtaaacccatcgaagaattagtgacagaagcccagaagttggcg
gctaaaggtgttcaagagcttattctcatagctcaagatttaacttattacggactcgac
ctttataagaaaagaaatttggccgaattgttggagcaattggtaaaagtagaaggtatt
gaatggattcgtcttcattatgcttttccaacgggctttccaatggatgttttggatgtc
atgaaccgcgaaccgaaggtttgtaattatttagatattcccctacagcatatttccgat
gcgattctcaaaagtatgagaaggggcactacccaagagaaaacgaccaaattgttgaaa
gagtttagggcagccgttccgaacatgacaattagaactactttgattgtaggctaccct
ggggaaaccgaagaggattttgaaatcttgaaagaatgggtcaaagaaatgcgttttgaa
cgtttaggttgtttcacatacagtcacgaagagaatacgcatgcctattcacttgaggat
gatgtgccggaagaaataaaacaacagcgtgccaacgagattatggagattcaatctcaa
atttcttgggagctaaaccaagagaaaataggtcagacctttcgatgtatgattgaccgt
aaagagggtaattatttcattggtagaaccgaatttgattcacctgatgttgataacgag
gtgcttatagatgccaccaaacattatctaaaacaaggtgagttcgcagaaatacgtatt
ttcgaagcggccgatttcgacctttacggtgaacccgtttaa
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