Euzebyella marina: D1013_10395
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Entry
D1013_10395 CDS
T05677
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
emar
Euzebyella marina
Pathway
emar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1013_10395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emar03019
]
D1013_10395
Enzymes [BR:
emar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D1013_10395
Messenger RNA biogenesis [BR:
emar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D1013_10395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
ANIS5_cation-bd
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AYN67752
UniProt:
A0A3G2L643
LinkDB
All DBs
Position
complement(2439381..2440676)
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AA seq
431 aa
AA seq
DB search
MKFEELGLSQPILKALRSEGYSEPTPIQQKSIPILLKGKDLLGVAQTGTGKTAAFGIPIL
ERLLQTSKGQSGKKRVRALIVTPTRELALQIAESLSAYGRFTPITNTVIFGGVKQGQQVK
ALQKGIDILVATPGRLLDLMGQGFINLNDLEIVVLDEADQMLDMGFVHDVKKIIAALPSQ
RQSLFFSATMPQAIVELSQKLLGDFERVTIKPQQATAERVEQGVYFVSKRNKARLLIHLL
REKEQDSVLVFSRTKHGANKIVTKLEKADIRASAIHGNKSQTARQKALGSFKDGKLKVLV
ATDIAARGIDVEELSLVINYDLPNVPETYVHRIGRTGRAQASGTALSFCDKDERPYLKDI
EKLIKQQVPVMPEHQFVDDNEQQETPDKPKENSPKPRRNKGRYNSRSSNYRGKSNNRRNR
RPGGGKPKRKD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaagagctaggcttatcacaacctattctaaaggcccttcggtcagaaggt
tattcagaacccaccccaattcaacaaaagtctattcccattttattaaagggaaaagac
ttgttgggtgtagcccaaaccggtaccggtaaaacggcggcttttggtattcctattcta
gaaaggcttcttcaaacttcgaaaggacaaagcgggaaaaagagagtaagagcccttatc
gttacccctactcgggaactcgccctgcagattgcagaaagtctaagtgcttatggccgt
tttacacccatcaccaacacggtcatttttggtggtgtcaaacaggggcaacaggtaaaa
gctttacaaaaagggatagatattttggtcgcgaccccgggtagattgcttgatttaatg
gggcaaggttttatcaacttaaacgatttggaaatcgtggtactcgatgaagccgaccaa
atgcttgacatggggtttgttcacgatgtaaaaaaaatcattgcggccctgccttcccaa
agacagtccctatttttttctgccacgatgccacaggcaatcgtcgaattatctcaaaaa
ctcttgggcgactttgaaagagtgactatcaaacctcaacaggctaccgccgaacgtgtc
gaacaaggggtttatttcgtcagcaaaagaaataaggcacgcttactcattcatttgctc
cgagagaaggaacaagactcagttttggtcttttcaagaaccaaacacggggccaacaag
atcgttaccaaattggaaaaggccgatataagggcttcggccattcacggtaataaatcg
caaacggccagacagaaggcactgggaagctttaaagatggtaaattgaaggttttggtc
gctaccgatattgccgcaaggggtattgacgttgaagaactgtcattggtcattaattac
gatttaccgaatgtacctgaaacctatgtacatcgaatcggaagaaccgggcgggcacag
gccagtggtacggccctttcattctgtgacaaagatgaaagaccctacttaaaagacata
gaaaagttgatcaaacagcaagtacctgtaatgccagagcaccaatttgttgatgataat
gaacaacaggaaacccctgacaaacctaaggaaaacagtccgaaacctagaagaaacaaa
ggcaggtacaactctagaagttcaaattatagaggaaaaagcaacaataggcgcaatagg
cgaccaggtggtggaaagccgaaaagaaaagattag
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