Euzebyella marina: D1013_10840
Help
Entry
D1013_10840 CDS
T05677
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
emar
Euzebyella marina
Pathway
emar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1013_10840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emar03019
]
D1013_10840
03009 Ribosome biogenesis [BR:
emar03009
]
D1013_10840
Enzymes [BR:
emar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D1013_10840
Messenger RNA biogenesis [BR:
emar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D1013_10840
Ribosome biogenesis [BR:
emar03009
]
Prokaryotic type
rRNA helicases
D1013_10840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AYN67832
UniProt:
A0A3G2L6C7
LinkDB
All DBs
Position
complement(2543582..2545348)
Genome browser
AA seq
588 aa
AA seq
DB search
MTKFEALGLNKALLNAVTDMGFESPSEVQEKAIPILLDSESDLVALAQTGTGKTAAFGFP
LIQKLDHNSRTTQGLILSPTRELCLQITSEMQAYSKYVNGLSTVAIYGGASITEQARQIK
RGAQIVVATPGRMKDMIGRGLVDISKIDYCVLDEADEMLNMGFYEDIKEILSNTPQDKST
WLFSATMPKEVATIAKKFMHNPIEITVGAKNAGTNNVQHEYYVVSGRDRYPALKRLADAN
PDIFSVVFCRTKRDTQRVAEKLIEDGYNAGALHGDLSQNQRDLVMNAFRKKQIQMLVATD
VAARGIDVDDVTHVINYQLPDEIETYTHRSGRTGRAGKSGISMVIITKSELRKIRSIEKI
IQQSFISKSIPTGIEICEIQLYHLASKIKDTKINKDVENYLPAINEVLEGIDRDELIKKI
VSVEFTRFSNYYNKTKDLNSSSDHSSSATNASSNGSVRYFINVGEKDGYDWMSLKDFLRD
TLGLGKEDIYKVDTKDSFSFFNTDEVHTESILSFFTDFKLEGRFINVEISKNPGGDGGGG
RGRKGKSKRRGKERDKGNRGKRRDRGASKGGSNFSGKRRSKKNRSDFF
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatttgaagcattggggcttaacaaggcccttttaaatgccgttacggatatg
ggttttgagagcccatccgaagtacaggaaaaagcaatcccgattttattggattcagaa
tctgacctagtggcactcgcccaaacaggaacaggtaaaacagccgcatttggctttcca
ctgattcaaaagcttgaccacaacagtagaacaacccaaggtcttattctatcaccaaca
agagaactttgccttcaaattaccagtgaaatgcaggcatattcaaaatatgtgaacgga
cttagcaccgttgcaatctatggtggtgccagcattacagagcaagctcgccagattaaa
agaggagcacaaatagtagtagccactcctggccgtatgaaagacatgatcggtcgcgga
ttggttgatatctcaaaaatagattattgcgtacttgatgaagccgatgaaatgttgaac
atgggcttctatgaagatataaaagagattctctccaatacgcctcaagacaaatcaact
tggttgttttctgccactatgccaaaagaagtggccactattgccaaaaaattcatgcat
aaccctattgagataaccgtaggggcaaaaaatgcgggtaccaataacgtacagcatgaa
tattatgtggtgagtggtagagatagatatcctgctcttaagcgtttggccgatgccaac
ccagatatcttttcggttgttttttgccgaactaaaagagatactcagagagtagctgaa
aaactgatagaagatggctataatgcaggtgcgttacatggtgacttgagtcaaaaccaa
cgtgacctggtaatgaacgccttcagaaaaaagcagattcagatgttggtagccacagat
gtggcggcaagaggtattgatgttgacgatgttacccatgtaatcaattaccaactaccg
gatgaaatagaaacttatacccaccgtagcggaagaaccggtcgtgcgggcaaatctggt
atatcgatggtaattattaccaagagcgagctaagaaaaatccgttccatcgaaaaaata
attcagcagagcttcataagcaaaagtattcctacaggtattgaaatctgtgagattcag
ctttatcatttggccagtaaaataaaggataccaaaatcaacaaagacgttgaaaattac
ttgcctgctattaacgaggtacttgagggaattgaccgtgatgaactgatcaagaagata
gtttcggtagaatttacaaggttctccaattactacaacaaaacaaaagatttaaattca
tcttctgaccacagctcttccgctactaatgcgtcatctaatggttcggttagatacttt
atcaacgtgggtgaaaaagatggttacgactggatgtctttaaaggattttcttcgcgat
acactcggcttaggtaaagaagatatctataaagtagatactaaagactctttttcattc
tttaatacagatgaagtgcataccgagagtattttaagcttcttcaccgactttaaatta
gagggtcgctttattaatgtcgaaatctccaagaacccaggtggtgatggtggcggagga
agaggccgtaaaggaaaatcgaaaaggagaggtaaagaacgtgacaaaggaaatcgtgga
aaacgcagagatcgcggtgcttccaaaggaggttcgaacttctcgggaaaaaggaggagc
aaaaagaaccgtagtgatttcttttag
DBGET
integrated database retrieval system
