Euzebyella marina: D1013_12670
Help
Entry
D1013_12670 CDS
T05677
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
emar
Euzebyella marina
Pathway
emar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
emar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D1013_12670 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emar03400
]
D1013_12670 (uvrA)
DNA repair and recombination proteins [BR:
emar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1013_12670 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D1013_12670 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND1
nSTAND3
MeaB
AAA_25
AAA_21
Viral_helicase1
cobW
BCA_ABC_TP_C
AAA_23
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AYN68164
UniProt:
A0A3G2L7A1
LinkDB
All DBs
Position
2939760..2942591
Genome browser
AA seq
943 aa
AA seq
DB search
MINYEENIEVQGARVHNLKNIDVTIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIET
FSAYARQFLGGLERPDVDKIDGLSPVIAIEQKTTSKSPRSTVGTITEIYDFLRLLFARAA
DAYSYNTGEKMVSYSDEQIKELIKEDYNGKKINVLAPVIKSRKGHYRELFEQIGKQGFVK
VRVDGEIKDIVKGMKVDRYKTHDIEIVIDRLKIADSEELDKRLTETINTAMYSGDNVLMV
LEEGQAEARYFSRDLMCPTTGISYPVPEPNTFSFNSPKGMCPHCNGLGHVYEVNENKIFP
NKKLSIKSGGIAPLGDYKKSWAFKQVETIAQRYGFELTDPIEKIPQEAIKVLLHGGNESF
DVDSKTLGVKRTYKIDYEGISNFIKTQYEEAATTSLKRWAKDFMDKIVCPECEGSRLRKE
SLNFKIGEKNIAELAHLDISDLSVFFEGLENELTGNQKKIAEEIIKEIRARVRFLLDVGL
DYLSLNRSSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNTRLIQSLESLR
DIGNSVIVVEHDRDMIERADHVIDIGPKAGKHGGEIISEGKPSELKKHNTLTAGYITGVR
EIAVPEKRREGNGKKIVLSGCTGNNLKNVTVEFPLGKMIGVTGVSGSGKSTLINETLYPI
MNAYYFNGVKKPMPYKKIKGLEHIDKVIDINQSPIGRTPRSNPATYTGVFSEIRSLFTKT
PEAAIRGYKPGRFSFNVKGGRCETCQGGGLRVIEMNFLPDVYVDCETCNGKRFNRETLEI
RYKGKSIADVLEMTINEAVDFFENIPKIYRKLKTIKDVGLGYISLGQQSTTLSGGEAQRI
KLATELSKRDTGNTFYILDEPTTGLHFEDIRVLMEVLNRLVDKGNTILVIEHNMDVIKMV
DYIIDIGYEGGRGGGMVVAKGTPEEVANDKKSYTAQFLKKELH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgatcaattacgaagaaaacattgaggttcaaggggccagggttcataatttaaaaaat
attgacgttactataccacgtgaaaaactagtggtgattaccggtctttccggtagtggc
aaatcgtctctggcattcgacacaatttatgccgaaggtcaaagaaggtatatcgaaact
ttttctgcctacgcccgccagtttctaggcggattagaacgacccgatgtcgataaaatc
gatgggctctctcccgtaattgcgattgaacagaaaactacttcgaaatcgcctcgatct
accgttggtaccattaccgagatttacgattttttacgcctgctttttgcgagggccgca
gatgcctatagctataatacaggtgaaaaaatggtcagttatagcgatgaacaaataaag
gaacttattaaagaagattacaatggcaagaaaataaatgttctggccccggtaatcaaa
tctagaaaaggtcattaccgcgaacttttcgaacaaataggcaagcaggggtttgtaaag
gtgagagtcgatggagagattaaagatatcgtgaaaggtatgaaggtcgaccggtacaaa
acccatgatattgaaatagtaatcgataggcttaaaattgctgattcagaggagctagac
aaacgtctgaccgaaactataaatacggccatgtacagcggtgataatgtgctcatggtt
ttagaagaaggtcaagcagaggctcgttattttagccgtgacctcatgtgtcctactacc
ggcatatcttaccctgttcccgaacccaatactttttcctttaattccccgaaaggtatg
tgcccccattgcaatggtcttggccatgtatatgaggtaaacgagaataaaatctttccg
aataaaaagctgagcattaaatcagggggcattgctcccttgggagattataaaaaatca
tgggccttcaaacaagtagaaaccatcgcgcaacggtatggtttcgagttgaccgaccct
atcgaaaaaatacctcaagaagctatcaaggtgcttcttcatggaggaaatgaaagtttt
gatgtcgactcaaaaaccttaggggtcaagcgcacctataaaatcgattacgaaggtatt
tctaacttcattaaaactcaatacgaagaggcggccaccacttccttaaaaaggtgggcg
aaagactttatggataaaatagtgtgccccgaatgtgaagggtcgcgcttacgcaaagaa
tctttgaattttaagattggcgaaaaaaatattgccgagcttgcccatttagatatttct
gatctttccgttttcttcgaagggttggaaaacgagctaactggcaatcaaaaaaagata
gctgaagaaataattaaggaaattagggccagagtacggtttttactagatgtcgggcta
gattacctatccctaaaccgtagctcaaaatcgttatccggcggggaggcacaacgtatt
cgcttagcaacacaaattggttcgcagttagtaggtgtgctttatattttagatgaacct
agtatcggcctgcatcaacgtgacaatacgcgacttattcaatctttggaatcacttcgg
gatattggcaattcggtaatcgtggtcgagcatgacagagatatgatagaacgcgcagac
cacgttattgatatcggaccaaaggccggtaaacacggtggggaaattatatctgagggt
aagccgtccgaattaaaaaagcacaacactttaactgccggatatatcacaggtgttaga
gaaattgccgtacccgaaaaaagacgggaaggcaatggcaaaaagattgttctatccggt
tgtacaggcaacaaccttaagaacgttacggtagaatttcctttaggaaaaatgattggt
gttacaggtgtttccggtagcggcaagtcgacactgatcaacgagaccctctaccctatt
atgaacgcctattattttaatggcgttaaaaagcccatgccatacaaaaaaattaaaggt
cttgaacatatcgataaagtaatcgatatcaatcaatcgcccattggtagaacgcctcgg
tcaaacccggccacctataccggagttttcagtgaaattcgttctctatttaccaaaact
cctgaagccgctattagaggttacaaacccgggcggttcagttttaatgtgaagggtggt
cggtgtgaaacttgtcaaggcggcggattgcgtgtcattgaaatgaactttctgccagat
gtatacgttgattgcgagacttgtaatggcaaacgttttaatagagaaacccttgaaatt
agatacaagggcaagtcaattgccgacgtattggaaatgaccattaatgaggcagttgat
ttctttgagaatattcctaaaatatatagaaaacttaagaccattaaagatgttggtctt
ggttatatttcgttagggcaacaatctacgaccctatcaggtggcgaagctcaacggata
aaattggccactgaactatctaaaagagatacgggcaatacgttttatatcttggacgaa
cccactaccggattacattttgaagacattcgtgtacttatggaagttttaaaccgtttg
gtagacaaaggaaataccattttggtgatagaacacaatatggatgtaatcaaaatggtc
gactacatcattgacattggttacgaaggtggccgtggcggtggcatggtagttgcaaag
ggaacgccagaggaagtggccaatgacaaaaagagctatacggcccaattcttaaaaaaa
gaacttcattga
DBGET
integrated database retrieval system