Euzebyella marina: D1013_14745
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Entry
D1013_14745 CDS
T05677
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
emar
Euzebyella marina
Brite
KEGG Orthology (KO) [BR:
emar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emar03009
]
D1013_14745 (rlmD)
Enzymes [BR:
emar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
D1013_14745 (rlmD)
Ribosome biogenesis [BR:
emar03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D1013_14745 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
TRAM
PCMT
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_11
N6_N4_Mtase
PrmA
FtsJ
Methyltransf_4
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AYN68548
UniProt:
A0A3G2L8E6
LinkDB
All DBs
Position
3448975..3450384
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AA seq
469 aa
AA seq
DB search
MRKNRKRQVFENVEVVDAGAKGKTIGKAPDGRVIFLTNTVPGDIVDVQTTKKRKAYFEGV
ATHFHELSDKRTTPECQHFGVCGGCKWQDMGYEHQLFYKQKEVENNLRRIGHLDLPATTP
ILGSKKRYFYRNKMEFSFSDSRWLTLDEINSDEEIKDKHALGFHIPGMWDKILDIKKCHL
QQDPSNAIRLATRNFAIENNLSFFNPRNQYGLLRTMMIRTASTGELMLLIQFYEDDETAR
NLLLSFLENQFPEITSLLYVVNQKQNDTIYDQEVICFAGRDHIFEEMEGLQFKITAKSFY
QTNSEQAYELYKVTRDFAALKGDELVYDLYTGTGTIAQFVAKTAKKVVGIESVLEAIADA
KANAKRNEIENVSFFVGDMKNVFNEAFISENGIPDVIITDPPRDGMHKDVVQQILNIAPK
KVVYVSCNSATQARDLELMKETYKVVKVQPVDMFPQTHHVENVVLLEKI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaaatagaaagcgacaggttttcgaaaatgtagaagtggtcgatgcaggtgcc
aaaggtaaaaccatcggtaaagcacccgacggaagggtcatttttttgaccaataccgta
ccgggcgatattgtagatgttcagaccaccaagaagagaaaagcctacttcgagggtgta
gccacccattttcatgaattatcagacaagcgaacaacacccgaatgccaacatttcggg
gtttgcggcgggtgtaaatggcaagatatgggctatgagcatcagcttttttacaaacag
aaagaagtagaaaacaacctaagacgaatcgggcatttagacttacctgccactactcct
attttaggttctaaaaagaggtatttctacagaaataaaatggaattttccttttcggat
agtagatggttgaccctagatgaaatcaattctgatgaagaaataaaggataagcatgcc
ttgggctttcacattcccggtatgtgggataaaattttagatatcaagaagtgtcatctt
cagcaagacccttcaaatgcaatccgtctggcgacccgtaactttgctatagaaaacaat
ttgagctttttcaacccaagaaatcagtacgggctgctcagaaccatgatgatacgaacc
gcttcgacgggcgagttaatgttacttattcagttttatgaagatgatgaaacggccaga
aacttacttctaagttttttagagaatcagtttcctgaaataacttcattgctttacgtg
gtcaatcaaaagcagaacgacaccatttacgaccaagaggtcatttgttttgctggtcgc
gatcatatttttgaagagatggaaggtcttcaatttaaaataaccgccaaatctttttac
cagaccaattctgaacaagcttacgaactgtacaaggtgactagagattttgctgcccta
aagggagatgaactggtgtatgacctttataccggtacaggaaccattgctcagttcgtt
gccaaaacagccaagaaggtggtgggtatcgaatcggtattagaagccattgccgatgca
aaggccaatgccaaaagaaatgaaatagagaacgtttccttttttgtgggagatatgaag
aatgtcttcaatgaggcctttatttcagagaatggcatacccgatgttattattaccgac
cccccgagggacggtatgcacaaagatgtggttcaacaaatcttgaacattgctccgaaa
aaagtagtgtatgtaagttgcaacagtgccacacaagccagagatttggagctcatgaaa
gaaacctataaggtggtgaaggttcaacccgttgatatgtttccgcaaacgcaccacgtt
gaaaatgtcgtacttttggaaaagatatag
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