Euzebyella marina: D1013_17865
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Entry
D1013_17865 CDS
T05677
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
emar
Euzebyella marina
Brite
KEGG Orthology (KO) [BR:
emar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emar03032
]
D1013_17865 (topA)
03400 DNA repair and recombination proteins [BR:
emar03400
]
D1013_17865 (topA)
Enzymes [BR:
emar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D1013_17865 (topA)
DNA replication proteins [BR:
emar03032
]
Prokaryotic type
DNA Topoisomerases
D1013_17865 (topA)
DNA repair and recombination proteins [BR:
emar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D1013_17865 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AYN69113
UniProt:
A0A3G2LA79
LinkDB
All DBs
Position
complement(4143978..4146455)
Genome browser
AA seq
825 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGSDYKVESSFGHIADLPSKELGVDVDNDFEPKYIVDSDK
KALVKKLRDLAKKAETIWLASDEDREGEAISWHLAETLKLDKNKTKRIVFNSITKSAIQK
AIENPRSINYNLVNAQQARRVLDRLVGYELSPVLWKKIKPGLSAGRVQSVAVRLIVERER
DIEAFTPEASFRIAAEFKTSEANVFAAKLNKTFASKEEAEAFLKQNIGADFSVGSLDKKP
AKKSPSAPFTTSTLQQEASRKLYFSVSRTMQVAQRLYEAGLITYMRTDSVNLSSEAINAA
KEAIVQNYGEKYSEVRNFKGKTKGAQEAHEAIRPTDITNQSPSLERDQMKLYELIWKRTI
ASQMSDAELERTNVKVVANTHSEQFSANGEVIKFDGFLKVYLESVDEEDVEEQEGMLPAM
KEGEALTNNYITATERFTRPPYRFTEASLVKKLEELGIGRPSTYAPTISTIQNRGYVEKG
TIDGTERKYAQLLLESGAVKEKQLSEMVGSDKGKLVPTDIGMIVNDFLVSHFANILDYNF
TAKVEEDFDEIAEGEEDWQKVMQAFYKDFHPTVLDVQENADRASGERVLGEDPKSGRQVS
VRLGRFGPMVQIGTVDDEEKPQFASLLPDQSLNTITYEEAMELFKLPRKLGVYEGEEVEA
NVGRFGPYVRFGKKFVSLDKGESAFDVDFERAVELIKAKQKADAPIYEYEDKEVTKGTGR
FGPFIKWDGMFINVNKKYDFDNLSEADIIELIENKKQKEKEKVVQNWEEEGIRIEKARWG
RHNIIKGRTKVELAKTVDAAKMSLDEAKALIEAKVPKKKTRAKKK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaatttagttatagtagagtcgcccgcgaaggcaaagaccatcgagaaattt
ctcggaagtgattataaggtcgagtcaagttttgggcacattgcagatttaccttcaaaa
gaactcggcgtagatgtcgataatgatttcgaacccaaatatatcgttgacagcgataaa
aaggcacttgtcaaaaaattacgtgatttagcaaagaaagcagagaccatatggcttgca
agtgatgaagaccgcgaaggagaagccatatcatggcacttggccgaaactttaaaactc
gataagaataagaccaagagaatagtattcaactcgattaccaagagtgccattcaaaag
gctatcgaaaacccaaggtctatcaattataatctcgtaaatgcacaacaggccagacgc
gtattggatcgtctggtaggttatgagctttctcctgtactatggaagaaaataaaacct
ggcctttcggctgggcgtgtacaatcggtagccgttcgattgattgtcgaaagggaaagg
gatattgaagcatttaccccggaagcctcttttagaattgcagcagaattcaagacttca
gaagcaaatgttttcgctgccaagctcaataaaacctttgcttcaaaagaagaagccgaa
gcttttctgaaacaaaatatcggtgctgacttttcggtgggtagtttagataagaaaccg
gccaaaaaatcaccgtccgcaccctttaccacttctacattgcagcaagaggcatctaga
aagctatacttttctgtttctagaactatgcaggtagcgcagcgtttatacgaggcaggg
cttattacttatatgagaaccgatagtgttaacctttcaagtgaggccatcaacgctgct
aaagaagccattgttcagaactatggtgaaaagtacagtgaggtcagaaattttaagggt
aagaccaagggagcgcaagaagcgcacgaagctattcgacctactgatataaccaatcaa
tctccttctttggagcgtgatcaaatgaaattgtacgagttgatttggaaacgtaccatt
gcctctcaaatgagcgatgccgagttggaacgtaccaatgttaaggttgttgccaacacg
cattccgaacagttcagtgctaatggtgaggtcattaagttcgatggttttttaaaggtt
tatttggaaagtgtcgatgaagaagatgtagaggagcaagaaggaatgctgccggccatg
aaagagggcgaggcattgaccaataattatataacggcaacagagcgttttacacgtccg
ccatatcgtttcacagaggcctccttggtaaagaaactagaagagttgggtattggtaga
ccatctacctacgccccgaccatttctaccattcaaaacagaggttacgtagaaaaagga
actatagatggtacggaacgaaaatatgctcaacttctcttggagtcgggcgcggtaaag
gagaaacaactttctgaaatggtaggttccgataaaggaaaattggttccgaccgatata
ggtatgatagtcaatgactttttggtaagtcatttcgctaatattcttgattataatttt
acggccaaagtcgaagaagattttgatgaaatcgccgaaggagaagaagactggcagaaa
gtaatgcaagctttttacaaagattttcacccaacggtgcttgacgttcaagaaaatgcc
gaccgggccagtggtgaacgcgttttgggtgaagaccccaaatcgggtcgtcaggtttcg
gtgaggttgggtcgttttggccctatggtgcagataggtacggtcgatgatgaagagaaa
ccacagtttgccagtctgttgcctgatcagtcgttaaataccatcacttatgaagaggcg
atggagttatttaaacttcctagaaaactaggagtatatgaaggggaagaggttgaggcg
aatgttggtagattcggaccgtacgttcgattcggaaaaaagtttgtttccttggataag
ggagaaagcgcctttgatgtcgattttgaaagggcggtagagctcatcaaggcaaaacaa
aaggccgatgctcctatttatgaatacgaagataaagaggttacgaagggtaccggtaga
ttcggccctttcattaagtgggatggcatgttcatcaatgtgaacaaaaaatatgatttc
gataacctttctgaagctgatattattgaactgatcgaaaacaaaaagcagaaagaaaaa
gaaaaggtcgttcaaaattgggaggaagaaggtatacgaattgaaaaggcgcgatggggc
aggcataatattattaaaggaagaacgaaagtagaactggccaaaaccgttgatgcggcc
aaaatgtctttagatgaagcaaaagctctaattgaggcgaaggtacctaaaaagaaaacc
agggcaaagaagaaataa
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