Eublepharis macularius (Leopard gecko): 129324463
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Entry
129324463 CDS
T09084
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129324463 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129324463 (CLP1)
Enzymes [BR:
emc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
129324463 (CLP1)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
129324463 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
AAA_18
ATP_bind_1
TniB
AAA_22
AAA_16
CbiA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
129324463
NCBI-ProteinID:
XP_054827702
UniProt:
A0AA97KS78
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All DBs
Position
2:complement(148915542..148923183)
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AA seq
425 aa
AA seq
DB search
MAEEAGDEKKLVAKFELERETELRFEVEASQTVQLELLTGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSVQLTGRTEVAYVSKDTPMLLYLNTHTALEQMRWQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSISIPGTMGALYIERPADVEEGFSV
QAPLIYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRPSVSGCIINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRREFRDER
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTADGTDENISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaagctggagatgaaaagaaactggtggccaagtttgaactggagagggaa
acagagcttcgctttgaagttgaagcctcgcaaactgtccaactggagcttttgacaggc
atggctgagatctttggaactgaattgacacgcaacaagaaattcacttttgatgctggt
gctaaagtggctgtcttcacttggcatggctgttcagtgcagcttactggtcggactgaa
gtggcctatgtgtccaaagacacccccatgctgctgtacctcaacacccatacagccctg
gagcagatgcggtggcaggctgaacgtgaagatgagcgggggcctcgggtcatggtggtg
ggccctacagatgtaggcaagtcaactgtttgccgcctgctgctgaattatgctgtgcgc
ttagggcggcggcccacttttgtagagctagatgtaggtcagggttcaatctctattcca
ggcactatgggggctctctatattgagcgtcctgcagatgttgaagaaggtttctcagtt
caggcccccctgatctatcattttgggtccaccacacctggtactaacatcaagctctat
aataagatcacatcccgcttggcagatgtcttcaaccagcgctgtgaagttaatcgtcgg
ccttcagtcagtggttgtatcattaatacctgtgggtgggtgaaaggatctgggtaccag
gcacttgtacatgctgcttcagcctttgaagttgatgttgtagtagtgctggaccaggag
cgcctttacaatgaactgaagcgagacctgccacactttgttcgaacagtgctgctcccc
aagtctggtggagtagtggagcgttccaaggacttccgacgggagtttcgggatgaacgc
atacgtgaatacttctatggttttcgaggatgcttctacccacatgcctttgatgtcaag
ttctcagatgttaagatatacaaggtgggagcccctaccatccctgactcatgtctgccc
ctgggcatgtcacaagaagataaccagcttaagttggtaccagttacacctggacgtgac
atggtacaccatctgttaagtgttagtactgctgatggcactgatgagaacatctctgag
actagtgtggctggcttcattgtagtcactggagtggatttggagcggcaggtcttcaca
gtgctctcaccagcacctcgtccattgcccaagaacttcctgctcatcatggacattcgt
ttcatggatctcaagtag
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