Eublepharis macularius (Leopard gecko): 129325611
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Entry
129325611 CDS
T09084
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129325611 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129325611 (NUP98)
03036 Chromosome and associated proteins [BR:
emc03036
]
129325611 (NUP98)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129325611 (NUP98)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129325611 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
MITF_TFEB_C_3_N
Motif
Other DBs
NCBI-GeneID:
129325611
NCBI-ProteinID:
XP_054829362
UniProt:
A0AA97J0W3
LinkDB
All DBs
Position
3:complement(187012597..187068747)
Genome browser
AA seq
1798 aa
AA seq
DB search
MFNKSFGTPFGSGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSNNNTGGLFGSTQAKPG
GLFGSSTFSQPATSSTSTGFGFGTSTGTSSGLFGTASTGGGLFSSQNNAFAQSKPVGFGN
FGTSTSSGGLFGTTNTTSNPFGGTSGSLFGSTSFTTVPTGTTIKFNPPTGTDTMVKSGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATPGLFGASTATSSAAT
GLFGSSTTNTGFSYGQNKTGFGTSTTGFGAGTGGLFGQTQQTTSLFNKPFGQATTAPNTG
FSFGNTGTIGQPNTNTMSLFGATQPSQTGSLFGTTANTNTATAFGTGTGLFGQANTGFGV
GGSSLFSNKPAGFGTTTTSAPSFGTTSGSLFGFGASTTGNSLFGNKPAAGPLGTGLGTGF
GTALSAGQTSLFGSTQPKLGATVGTGAFGAPGFNTGTASLGFGAPQPAVALTDPNASAAQ
QAILQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTTGSSKSQLFDGLDDDEPALSNGAFMPKKSIKKLVLKNLNNSSLFSPVGGE
ADDLASPSEYPENGERFHFLSRSVDENHRPDGEQEEEEGHHEVTSFYTNPIAKPIPQTPE
NLIHKHQNHVDDTIMALNMRAALRNGLEGSSEDASFPEESLQDDREEENENMHQAHPAGI
CLTRVGYYTIPPMEELAKMTNDKGECVVTDFTIGRKGYGSIYFEGEVSLTDLDLDEIVHI
RRKEVIVYPDDELKPPVGEGLNRRAEVTLDGVWPTDKTSRGLIKSPERLAEMNYEGRLEA
VSRKQGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPSKVEAKKLKTAPAPPPGQ
PQQVALSGKLVLSSQQSPEVEQLGKAVELDSDMADVTEAAPEFSAEESLAEEQELVPAST
HIASSLEINPHTLQIMKASLLVDEEDLDLILDHGFGRQLTPVDSPQAICSPRLPISSLSR
GQRSRPAVGGLLQSRLSSGSFLLPATSLQEGRSRRTSLLSVAPPVPPWPTLSPLASAFTV
PSSAPDIPLKVVGIRRQPGLVPLEKSVAYGKGKLLMDMALFMGRSFRAGWGPNWTLAHSG
EQLSSSSDLADNPDVSMEYGFLPAPVAPKQLSESPFKVHIEKLSLEGKTADGDQRLYLVP
LEIKLKHSTVHMDEPCPLLTPNPGVTAIHEYAGCAREASGDPEETEAVVKHWCLVWTLCE
ALWGHLKELEAHLDEPTEYIVALERRKAFSQWLSQAASERIEDEVSLSQHDSPAEAVFSY
LTGKRISEACGLAQQSGDHRLALLLSQLVGSQEVRELLAMQLADWHQLQADGFIQEERLR
IFALLAGKPVWHLSEKRSINVCSQLDWKRALGIHLWYLLPSTAPLSQALGLYEAAFQDSS
ACDKYACSPLPPYLEGSGHVAEEGDSQHSLQDVCFHLLKLYSDRCYDLHELLDPRSITAD
PLDYRLSWHLWEVLRALNYTHLSEQCQGVLNASYAAQLEREGLWEWAVFVLLHTPHAHTR
ERAVRELLNRHCLLLETPESWAKEAFLMERLCVPPEWIYEAKAVRARMQRDKHKEALYLS
RAGHWNQCHRLVVKHLAADAIINENYTYLKGFLEDMSAPQRSRLIQDWETAGLVFLDYIR
VIEMLSRIQQLDCSGYELEDLHTRVVSLCERVQQVQCCSAKDRLAQSEMAKSLANILRVV
LSLQHPPDSASDAIPDIQRVPLRLLAPHIGQLPMPEDYALEELRGLTQSYLRELTVVQ
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcgttcgggacgccttttggaagcggcacagggggctttgggacaact
tccacttttggacagaataccggctttggcacgacgagcggaggagcatttgggacatcc
gcttttggatcaaacaataatacaggaggactctttgggagtacgcaggccaagccagga
gggctgtttggttcaagcacgttcagccagccagccacgtcctccaccagcaccggcttt
gggtttggaacgtcaacagggacttccagtggcttgtttgggactgcgagcaccggagga
ggactcttctcatcccagaacaatgccttcgcacagagtaaacccgtggggtttggcaac
tttgggacaagtacgagcagcggtggtttatttggaaccaccaacacaacttccaaccca
tttgggggcacatctggctccctctttggatccactagctttaccactgttccaactggc
actaccattaaattcaatccaccaaccggtactgacacaatggttaaatctggagtcagt
acaaacatcagcacaaaacatcaatgcattacggctatgaaggaatacgaaagtaaatct
cttgaggaactccgcttggaagattatcaagcaaaccgcaaaggacccaccaaccccgta
ggagccggagccactcctgggctgtttggagcatctaccgcgacgtccagcgccgccaca
ggactcttcggctcctccactactaacactggtttttcgtacgggcagaataaaacgggc
tttggaaccagcacgacagggtttggagcaggaacggggggcctctttgggcagacccag
caaaccaccagccttttcaacaagccctttggccaggcgacaacagcaccgaacactggc
ttttcgtttgggaacactggcaccattggacagcccaatacaaacaccatgagcttgttt
ggagcaacgcagccctcgcaaaccggaagcctttttggaacaactgcaaatacgaatact
gcaactgcctttggaactgggacgggtctctttggacaagccaacacaggatttggtgtt
ggtggctcgtccctttttagcaacaagcctgctggatttgggacgaccaccaccagcgca
ccctcgtttggaacaacatctggcagccttttcgggtttggggcaagcaccactggaaat
agcctgtttggaaacaagcctgcggctgggcctctgggaactggacttggaacaggattt
gggacagcccttagtgcagggcagacttcgttgtttgggagcacccagcctaaactaggc
gccactgtggggacaggagcattcggtgcccctggatttaatacaggaacagccagcctg
ggctttggagctccccagcctgccgtggctttgacagacccaaacgcatcagcggcccag
caggccattcttcagcagcatctcaacagcctgacttactcgccttttggggactcccct
ctcttcagaaaccccatgtctgatcccaagaagaaggaagagagactgaagccaaccaat
cccgcagcccagaaggcattgaccacccccactcactacaagctgacccctcgacctgca
acaagagtgcggccgaaagccttgcagacgacaggatcctctaaatcacaactctttgat
ggcctggatgatgatgagccagccctgtccaatggggctttcatgcccaagaagagcatc
aagaagctagttctgaagaacctcaacaacagcagcctcttttctcctgtcggcggtgaa
gcggatgaccttgcctctccttcggagtatcctgaaaacggggaacgattccacttcctc
tccaggtcagttgatgagaaccaccgaccagacggagagcaggaggaggaggagggtcat
cacgaagtgacgagtttctacaccaaccccatcgctaagcccatcccgcagactccagag
aacctcatacacaagcaccagaaccatgtggacgacaccatcatggccctgaacatgcga
gcggccctgcggaatgggctggaaggcagcagcgaagacgcctccttccctgaggagtcc
ctgcaggatgaccgggaagaggagaatgagaacatgcaccaagcacacccggcagggatt
tgtttaactcgagtgggctactacacgattccaccgatggaggagctggccaaaatgacg
aacgacaagggagaatgcgtggtgaccgacttcaccataggccgtaaaggctatggctcc
atctactttgaaggagaagttagtcttactgacctggatctcgacgagatcgtgcacatc
cgcaggaaagaagttattgtctacccggatgatgagctgaagccaccggttggagaaggt
ctaaacaggcgagctgaagtcactctggacggggtttggccaactgataaaacctctcgc
ggcttgatcaagagcccagagcgcctggcagagatgaactacgaaggcaggctggaggca
gtctctcgaaagcagggagcccagttcaaggaataccgcccagagaccggctcgtgggta
ttcaaggtggcccacttctccaaatatggcttgcaagattctgacgaagaggaggaggag
cacccatcaaaagtggaggcaaagaagctaaaaactgccccggcacccccaccagggcag
ccccagcaagtggccctgagtgggaagctagtgctctcttctcagcagagcccagaggtc
gaacaactaggcaaggccgtggagctcgacagcgatatggccgacgtcacggaagcagct
ccggagttttccgcagaggagagccttgcggaggagcaggagctggtgccggcttccaca
cacatcgcgtcctctctggagatcaatcctcacaccttgcagatcatgaaggcctctttg
cttgtagatgaggaggatttggacctgatcctagaccatggttttggtaggcagcttacc
cccgtggacagcccccaagcgatctgttctcctagacttccaatctcctctttgtcacga
gggcagagaagccgccccgcagttggcgggctgctacagtcgaggctctcgagtggctcc
ttcctccttccagctacttccctccaagagggccgcagtcgaaggacttccttgctcagt
gtcgccccacctgtgccgccctggcccacgctttctccactagcttctgctttcacagta
cccagctcggcacccgacataccattgaaagtagtgggtatccgcaggcagcctggcctg
gtacccctggaaaaatctgttgcctatgggaaaggaaagctgctaatggacatggcgctc
ttcatggggcgctccttccgtgctggctggggacccaactggactcttgcccacagcgga
gagcagctgagcagttccagcgatctggcagacaaccctgatgtgtccatggagtatggg
ttcctgccagcgcccgttgctcctaagcagctctcagagtcccccttcaaagttcacata
gagaagttgagtttggaaggaaagacagcagatggcgaccagcgcttgtacctcgttcca
ttggagatcaagctgaagcatagcactgtccacatggacgagccgtgtcctctactgacc
cccaatcccggagtaacggccatccatgaatacgccggatgtgccagggaggcgtctgga
gacccagaggaaacggaagctgtggtaaagcattggtgcttggtgtggaccttgtgcgag
gcactttgggggcacttgaaggagttggaggcccacttggatgagcccaccgagtacatc
gtggctctggaacgccggaaggccttttcccagtggctctcgcaggcggcttctgagcga
atagaggatgaagtctctctcagccagcacgacagccctgccgaggcggtcttcagctac
cttactggaaagcggatcagtgaagcctgcgggctggcccagcagtctggggatcacagg
ctggcgctgctcctctctcagctggttggcagccaagaggttcgggaactcctggccatg
cagttggcggactggcaccagctgcaggcagacggcttcatccaggaggagaggctgcgc
atatttgccctgctagctggcaagccggtgtggcatttgtcagagaagaggagcatcaac
gtctgttcccagctggactggaagcgtgctcttggcattcacctctggtacctgcttccc
tccacagcacctctttcccaggccctcggtctgtacgaagcggcattccaggactcctcc
gcgtgtgataaatatgcttgttctccgttgcctccgtatctggaaggttcgggccacgtg
gctgaggaaggtgattctcagcactccctgcaggacgtgtgctttcacctgttaaagcta
tacagtgacaggtgttacgatctccatgaattgctggaccctaggagtatcactgccgat
cccttagactaccgcctcagttggcacctgtgggaagtgctgcgtgccttaaattacacc
cacctgtcggagcagtgccagggcgtgctgaacgccagctatgcagcccagctggagcga
gaggggctgtgggaatgggctgtctttgtacttcttcacacgcctcacgcgcacacgcgc
gagagggccgtgcgtgagctcttgaaccgtcactgcctgctcctggagacgcccgagtcc
tgggccaaggaggctttcctcatggagcggctgtgtgtgccgccagagtggatctacgaa
gccaaggctgtgagggccagaatgcagcgggacaagcacaaagaggccctgtacttgtcc
agagccgggcactggaaccagtgtcacagactggttgtcaagcacttggcggcagatgcc
attatcaatgaaaactacacttacctaaaggggttcctggaagacatgtctgccccgcag
cgcagccgactgatccaggactgggagactgccgggctggttttcttggactacatcaga
gtcatcgagatgcttagcaggattcagcagctggattgctctggatacgagctggaggat
ttgcacaccagagtggtgtccctgtgcgagagggtgcagcaggtccagtgctgcagcgcc
aaggacagactggctcagtcagaaatggccaagagcctcgctaacatcctgcgcgtggtg
ttgagcctgcagcaccctccggactctgcctcggacgccatccccgacatccagagagtg
ccattgcgcttgcttgccccccacatcggccagctccctatgcctgaggactacgccttg
gaggagctccggggtctcacgcagtcctacctgcgggaattgactgtggttcagtga
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integrated database retrieval system
