Eublepharis macularius (Leopard gecko): 129325681
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Entry
129325681 CDS
T09084
Symbol
PCDH17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
emc04515
]
129325681 (PCDH17)
Cell adhesion molecules [BR:
emc04515
]
Cadherins
Protocadherins
129325681 (PCDH17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_4
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
129325681
NCBI-ProteinID:
XP_054829484
UniProt:
A0AA97J1J3
LinkDB
All DBs
Position
3:10040733..10261426
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AA seq
1208 aa
AA seq
DB search
MSLPGACCLLLLLPLCWAPALALKNLNYTVPEEQGAGTVIGNIGRDARLQPGGSGGSPSA
ERARGGGGGGGGGARSSFRVLENSAPHLLDVDGESGLLYTKQRLDREALCRWSARCLLSL
EVFANDQEICMIKVEVQDLNDNAPAFPAEQVELDISENAAPGTRFPLASAHDPDAGENGL
RTYLLTRDDYGLFALDVKARGDGTKFPELVVQKPLDREEQSHHTLVLTALDGGQPPHSGT
VQVNVRLVDSNDNSPVFEAASYVVELPENVPLGTAVIDLNATDADEGTNGQVLYAFSGYT
PERVRQLFSLDPQSGLIRVKGNLDYEEGGLLEIDVQARDLGPNPIPAHCKVTVRLLDRND
NAPAIGFVSVRQGALSEAAPPGTVVALVRVTDRDSGKNGQLQCRVQGEGSGGDGAAPFAL
EENYDNLYTVVTDRPLDREVQDEYNVTLLARDGGSPPLNSTKSFTVRILDENDNPPRFNK
NLYVLQVPENNIPGEYLGSVLAKDPDLGQNGTVSYFILPGHVGDVSIFTYVSINPTNGAL
YALRSFNYEQTKHFEFHVLAKDSGSPHRESNTTVRVTVLDVNDNAPVIVVPALINDTAEL
QVPRNAGVGYPVGTVRALDSDFGESGHLTYEIVEGNEEHLFEMDPESGEIRTLHPYWEEL
SPVAELVVKVSDHGKPSLSAVAKLIVRALAGPLPEAGEPQVNGEQHRRPHWDLSLPLIVT
LSTVSIILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGGSGGGGGGGGGGGKGK
KKKISKNDIMLVPSEGEDSRGPLNVMNVVSSPSLATSPMYFDYQTRLPMSSPRSEVMYLK
PASNNLTVPQGHVGCHTSFTGQGTNLTEAPPSRMSIIQTDNFPAEPNYMGSRQQFVQSSS
TFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEQQGR
GQRPIVGICGPARCKEGKFSEQEECVNCTDECRVLGHSDRCWMPQFPTANQAENADYRTN
LFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQEV
PSASSSPTKTCMEPCATTKGPLDSCEVKTGALAEPSSQYLTATDSQYLSPSKQPRDAAFI
ASDQMARVFAEVHSRVSRDSAEMDSVLEQIDRSNRELGRESMDAEEVVREIDKLLQDCRG
NDPVAVRK
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgccgggcgcctgctgcctgctgctgctgctgccgctgtgctgggcgcccgcc
ctggcgctgaagaacctcaactacacggtgcccgaggagcagggcgccggcacggtgatc
ggcaacatcggccgcgatgcccggctgcagcccggaggtagcggcggctcgccgtcggcg
gagcgcgcccgcggcggcggcggcggcggcggcggcggggcccgctcgagcttccgcgtg
ctggagaactcggcgccgcacctgctggacgtggacggcgagagcggcttgctgtacacc
aagcagcggctggaccgcgaggcgctgtgccgctggagcgcccgctgcctgctctcgctg
gaggtcttcgccaacgaccaggagatctgcatgatcaaggtggaggtgcaggacctcaac
gacaacgcgcccgccttcccggccgagcaggtggagctggacatctcggagaacgccgcg
ccgggcacccgcttcccgctggccagcgcgcacgacccggacgccggcgagaacggcctg
cgcacctacctgctcacccgcgacgactacggcctcttcgcgctcgacgtcaaggcccgc
ggcgacggcaccaagttccccgagctggtggtgcagaagccgctggaccgcgaggagcag
agccaccacacgctggtgctgacggcgctcgacggcggccagccgccccactcgggcacc
gtgcaggtcaacgtgcgcctggtggactccaacgacaacagccccgtcttcgaggccgcc
tcctacgtggtggagctgcccgagaacgtgccgctgggcacggccgtcatcgacctcaac
gccaccgacgccgacgagggcaccaacgggcaggtgctgtacgccttcagcggctacacg
cccgagcgggtgcgccagctcttcagcctggacccgcagagcggcctcatccgcgtcaag
ggcaacctggactacgaggagggcggcctgctggagatcgacgtgcaggcccgcgacctg
gggcccaaccccatcccggcccactgcaaggtcaccgtccgcctgctcgaccgcaacgac
aacgcgcccgccatcggcttcgtctcggtgcgccagggcgcgctcagcgaggccgccccg
ccgggcaccgtggtggccctcgtgcgcgtcaccgaccgcgactcgggcaagaacgggcag
ctgcagtgccgcgtgcagggcgagggcagcggcggcgacggcgccgcccccttcgccctc
gaggagaactacgacaacctctacaccgtggtgaccgaccggcccctggacagggaggtg
caggacgagtacaacgtcaccctgctggccagggacggcggcagcccccccctcaactcc
accaagtccttcaccgtccgcatcctggacgagaacgacaacccgccccgcttcaacaag
aacctctacgtgctgcaggtgcccgagaacaacatccccggagagtacctgggctccgtc
ttggccaaggacccggacctgggccagaacggcactgtctcctacttcatcctgcccggc
cacgtgggggacgtctctatcttcacctatgtctccatcaaccccaccaatggcgccctc
tacgccctgcgcagcttcaactacgagcagaccaagcacttcgagttccacgtgctggcc
aaagactcgggctccccgcaccgcgaaagcaacaccactgtccgcgtcaccgtcctggac
gtcaacgacaacgcccccgtcatcgtggtgcccgccctcatcaacgacactgcggagctt
caggtcccgcggaatgccggggtggggtaccctgtgggcactgtccgggctttggatagc
gattttggggagagtgggcacctcacctatgagattgtggaaggcaacgaagagcacctc
tttgagatggaccccgaaagcggggagatccgcactctgcacccctattgggaagagctg
agccccgtggccgagctagtggttaaggtcagtgaccacgggaagcccagtctgtccgca
gtggccaagctgatagtccgggccttggccgggcctctgccggaagctggggagccccag
gtgaacggggagcagcacaggcgaccccactgggacttgtcgcttcccctgattgtcacc
ctcagcacggtttccattatcctgctggccgccatgatcaccatcgctgtcaagtgcaag
cgtgaaaacaaggagatccgcacctacaactgccgtattgctgaatatagccacccccag
ctggggggagggggcagcggtggcggtgggggaggaggcgggggcgggggcaagggcaag
aagaagaagattagcaagaatgacatcatgctggtgcccagcgaaggagaggacagccgg
gggcccctcaacgtcatgaacgtggtgagcagcccctccttggccacttctcccatgtac
tttgactaccagactcgcctgcccatgagctcgcccaggtctgaagtgatgtacttgaag
cccgcctccaacaacttgactgtgccccagggccacgtggggtgccacaccagcttcacg
gggcaagggacaaacctcacagaggctcccccgagccggatgtccataattcagacagac
aattttcccgccgagcccaattacatgggcagcaggcagcagtttgttcaaagtagctcc
acgttcaaggacccggaacgcgccagcttgagagatagcgggcacggtgacagcgaccag
gcagacagcgaccaagatactaacaaaggctcctgctgcgacatgtccgtgagggaggca
ctcaagatgaaaacgacttcgactaaaagccagccgctcgaacaagaacagcaagggaga
ggccaaagacccattgttgggatctgtggaccggcccgctgtaaagaaggaaaattttca
gaacaagaggagtgtgttaattgcaccgatgaatgccgggtgcttggtcattctgacaga
tgttggatgccccagttccctactgccaaccaggctgaaaatgcggattatcgaacaaat
ctctttgtccctacagtggaagcgaatgttgagactgagacttatgaaactgtgaacccc
acagggaaaaagactttttgtacatttgggaaagacaagcgagagcacacaattctcatt
gccaatgtgaaaccttatctcaaagccaaacgtgccctgagtcctctcctccaagaggtc
ccctcagcatcaagcagcccaaccaagacctgtatggagccttgcgccacgacaaaagga
ccgctggatagttgtgaagtcaaaacgggagccttggccgaacccagcagccagtacttg
acagccactgacagtcagtacttgtcgcctagtaaacagcccagagacgcggcgttcatc
gcgtctgatcagatggcgagggtctttgccgaggtgcattctcgagtcagccgagactct
gccgaaatggactctgtattggagcagatagatcgttcaaatagggaactagggagagag
tcgatggatgcagaggaagtagtgcgggagattgacaagcttttacaggactgtcgggga
aatgaccctgtagctgtgagaaagtga
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