Eublepharis macularius (Leopard gecko): 129325968
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Entry
129325968 CDS
T09084
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04517
IgSF CAM signaling
emc04520
Adherens junction
emc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129325968 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129325968 (AFDN)
04530 Tight junction
129325968 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
129325968
NCBI-ProteinID:
XP_054829969
UniProt:
A0AA97KT38
LinkDB
All DBs
Position
1:142387921..142611638
Genome browser
AA seq
1899 aa
AA seq
DB search
MSGGSGGSREEERRKLADIINHWNANRLDLFEISPPTEDLEFHGVMRFYFQDKAAGNFAT
KCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDIDEKPLVVQLN
WNKDDREGRFVLKNENDALPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRREKEA
LRQALDDRPFHGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFR
SSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEALEKYGLEKENPKDYCIA
RVMLPPGAQHSDDKGAKESVLDDDECPLQIFREWPSDKGILVFQLKRRPPDYVPKKSKKQ
IDGKPLKGKERVDGSGYGSSLPPEKLPYLVELSPDGSDSRDKPKLYRLQLSVTEVGTEKF
DDNSIQLFGPGIQPHHCDLSNMDGVVTVTPRSMDAETYVEGQLISETTMLQSGMKVQFGS
SHVFKFVDPIQDHIPKGRLDTGHMVKGLRHKAGAVQETTFDLEGDIHSGTGLPASKSTNR
LDSDRISTSSTAERGMVKPMIRIEQQQDYRRQDGRPQDAHGPELILPASIEFRESSEDAF
LSAVINYTNSSTVHFKLSPTYVLYMTCRYVLSSQYRPDISPAERSHKVIAIVNKMVSMME
GVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFK
YLVHCLQSELNNYMPAFLDDPEENNPQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFS
QLFHFINMWLFNRLVTDPDSGLCSHYWGAIIRQQLGHIEAWAEKQGLELAADCHLSRIVQ
ATTLLTMDKYSPEDIPNINSTCFKLNSLQLHALLQNYHCAPDEPFIPTELIENVVAVAEN
TADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGLQEFLDPLCQRGFCRLT
PHPRSPGTWTIYFEGADYESHLLQDNADLAQPLRKEPEIITVTLKKQNGMGLSIVAAKGA
GQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLE
VAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPW
TEYNEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGTKNAYVAGTTNKITSVSTGNLCTE
EQILPSRPEAYPIPTQTYTREYFTFPASKSQDRMGPAQNQWSNYEEKPQIATESNHYIST
AMQRVTRSQEELRDDKVYQPERNRLEVVIQKDVEYFDRKSDSDPWMNSSVDSSTSSQEHL
NHSTKSLPLGSCLTKSGPGRWKTPIASQPVSLAASQTTRTDLPPPPPPPPVHYAADFDGL
QMDLPLPPPPPPSSQLGTQSSSQVAAAERKKREEHQRWYEKEKARLEEERDRKRREQERK
LGQMRAQPLIPAQSLLPPVTVQQVKPEKPSTLQRSQETVIRELQPQQQPRTIERRDLQYI
TISKEELSSTDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQNKPDRSAEENDRLR
KLMLEWQFQKRLQESKQKDEDEDDEEDDDIDTMLIMQRLEAERRARLQDEERRRQQQLEE
MRKREAEDRARQEEERRRQEEERTKREAEQKRRQEEEYYNRLEAERRRQHDEAERRLLEP
DEPGLYRPPLPREYEFPPLPPSSNAPPPPPQRNTSYLKTQVLSPDTIYTAKFVAYNDDEE
EEDSCLATGQDKYSSTRKSYGDLPPATPKPQQPSRQPRPASDGIFLSNSFQPSSVNANST
AYKLNHPPPLPNKPSFINPSNSKGSNSYTGSTGAIAGSQESYLDPRDKKSKSQDGDLPGA
PENLTFRERQRLFSQGQDVSNKVKASRKLMELENELNTK
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcagtggcggcagccgggaagaggagcggcgcaagctggccgacattatc
aaccactggaacgcgaaccggctggacctgttcgagatcagcccccccactgaggatttg
gaattccatggagttatgagattttattttcaagacaaagcagctggaaattttgcaact
aagtgtatccgtgtgtctagcactgccacaacacaggatgtaatagagacacttgcagag
aaattccgtccagatatgcgaatgttgtcatcccctaaatactcgctttatgaagtgcat
gtcagtggagaagaaagaagattggatattgatgagaaacctcttgttgtgcaattaaat
tggaacaaagatgatagagaaggacggttcgtactcaagaatgaaaatgatgcacttcct
ccaaagaaggctcaaagcaatggccctgaaaaacaagagaaagagggagtgatccagaac
ttcaaacgaactctatcaaagaaagaaaagaaggaaaaaaagaggcgagagaaagaagca
ttgcggcaagctttggatgatagaccatttcatggggatgatattgagaattctcgtctt
gcagcagaagtctacaaagacatgcctgaaaccagtttcactcgcacaatatccaatcca
gaggtggtaatgaaacgacggaggcagcaaaaactagagaagagaatgcaagagttccgg
agctctgatggcaggccagattcaggtggaacactgaggatttatgcagacagtttgaaa
ccaaatataccatacaagacaatcctactatccactacagatactgcagattttgcagtt
attgaagctctggagaagtatggtttggaaaaggaaaatcccaaggattactgtattgct
cgtgtcatgcttcctcccggcgcgcaacattctgatgataaaggtgctaaagaatctgtt
cttgatgatgatgagtgcccacttcagatattcagggaatggccaagtgacaaaggaata
ttagtctttcagttgaaaaggcggccacctgattatgtcccaaagaagtcaaagaaacaa
attgatggaaagccattaaaaggaaaggaaagagttgacgggtctggttatggctcttcc
cttcctccagagaaactaccttatctggttgaattaagtccagatggttctgattccaga
gataaaccaaagctctatcgtttgcagttaagtgtgacagaagttggtactgaaaaattt
gatgacaactctattcagttgtttggtccaggaattcagcctcatcactgtgacctcagt
aatatggatggagttgttactgttactccaagaagcatggatgctgagacatatgtggaa
ggtcagctgatttcagagaccactatgctgcaaagtggtatgaaggttcagtttgggtcc
tctcatgtatttaaatttgtggaccccattcaggatcacattcctaaaggacgtctagac
actggacacatggtcaaaggactgcgacacaaagctggagctgtacaagaaacaacattt
gatttggagggagacatccatagtggaacaggattacctgcaagcaagagcaccaacaga
ttggatagtgacagaatatcaacatccagcactgctgaacgaggcatggtgaagccaatg
ataaggatagaacagcagcaggattaccggaggcaggatggcagaccacaggatgcacat
gggcctgaattgatattacctgccagcattgaattcagggaaagctctgaagatgccttt
ttgtctgccgttataaattacaccaatagctcaacagttcattttaagctgtctcccact
tacgtcttgtacatgacatgccggtatgtattgtcgagccagtacagacctgacatcagt
cctgctgaacgtagtcacaaagttattgcgatagtgaacaagatggtgagcatgatggaa
ggagttatacaggaggtagaccaggttgatcagaaacagaagaatattgcaggggcactt
gctttctggatggcaaatgcatctgagctgctaaacttcataaagcaggatcgagacctt
agccgtattacactagatgcacaggatgttttggcacacttagttcaaatggcattcaaa
tatctggtccattgtcttcagtcggagcttaacaactacatgcctgcatttcttgatgat
ccagaagaaaataatcctcaaaggcctaaaatagatgatgtcttgcatactctaactgga
gccatgtccctgctgcgacgctgtagagtgaatgctgcactaacaatacagctcttctcc
cagctgtttcactttatcaacatgtggctttttaatagattggttactgatccagattca
ggattatgttcacattactggggagccatcatccgccagcagctgggacatattgaagcc
tgggctgaaaaacagggcttggagctagctgctgactgtcaccttagcaggatagtacaa
gcaacaacactacttactatggataaatattcacctgaagacattccaaatattaacagt
acctgctttaaactcaattctcttcaactgcatgcattgctacagaattatcactgtgcc
ccagacgaaccatttatcccaacagagttaatagaaaatgttgttgcagtggctgaaaat
actgctgatgagctggctcgtagtgatggcagggaagttcagctagaagaagatcctgat
ctacaactaccttttcttttgccagaagatggctattcatgtgatgtggtcagaaacatc
ccaaatggattacaagaatttttagatccactttgccaaagaggattttgtagattaaca
cctcatccacgctcaccaggaacatggacaatctattttgaaggtgcagattatgaaagc
catctattacaagacaatgctgatctggctcagccattgagaaaggaacctgagataatc
actgtgactctaaaaaaacaaaatgggatgggcctgagcattgtggctgcaaagggtgct
ggtcaagataaacttggaatctatgtgaagtctgtggtaaaagggggtgctgcagatgtg
gatggtcggctggctgccggggatcagttgcttagtgtggatggacgcagtttagttgga
ctgtcccaagaaagggcagcagagctgatgaccagaacaggatcagtggtaacactggaa
gtggcaaaacaaggagcaatttatcatggtctagcaactctgcttaaccagccatcaccg
atgatgcaaagagtttcagaccgccgtggttcaggcaaaccccgaccaaagagtgaaggt
tttgagctatataacaattctgctcagaatggatcacctgagagtcctcagctgccttgg
acagaatataatgaaccaaagaagttgccaggggatgacagactgatgaagaatcgagct
gatcaccgatccagtcccaatgtagcaaatcagcctccaagtcctgggaccaagaatgct
tatgtggctgggactactaacaagataacatcagtctctactggaaatctctgtacagag
gaacaaatactaccatccagacctgaagcatatccaatcccaacacaaacttacaccagg
gaatattttacattcccagcctccaagtcccaggatagaatgggtcctgctcagaatcag
tggtcaaactatgaagagaaaccccaaattgcaacagaaagtaaccattatatcagcact
gcaatgcagcgtgtaacccgttctcaggaagaattgcgagatgataaagtttatcagcca
gaaaggaatcgattagaggttgtaatacaaaaagatgtggagtattttgataggaaatct
gatagtgacccatggatgaattcttctgtggattctagtacctcaagccaagagcatctg
aaccattccactaaatccctcccccttggatcttgtttaaccaaaagtggacctggccgc
tggaaaactcctatagcttctcaaccagtatcactggcagcttcccagactactagaaca
gatcttcctcctcctccccctccacccccagtacactatgcagctgactttgatggactg
cagatggatttgcctttgccaccacctccacctccttcaagccagttagggacacaatca
tcatctcaggttgctgctgcagagaggaaaaaaagagaagaacatcaaaggtggtatgag
aaagaaaaagctcgtttagaggaagagcgtgacaggaagcgtcgggaacaggaacgaaaa
ctgggacaaatgcgtgctcaaccactaattcctgctcagtctttacttcctccagtgact
gttcagcaagtaaagccagaaaagccttcaacattgcagaggtcccaggaaactgtcatt
agagaactgcagcctcagcagcagccccgaactattgagcgaagagatctgcaatacatc
actataagcaaagaagagttgtcctctactgatagcctgtctcctgatccttggaaaaga
gatgctaaggagaagctggagaagcaacagcagatgcacattgtggacatgctgagcaaa
gagattcaagaacttcaaaacaagccggatcgtagtgctgaagagaatgaccgcctgcga
aaactcatgctggagtggcagttccaaaaacgtctccaagaatcaaagcaaaaagatgag
gatgaagatgatgaagaagatgatgatatagacactatgttgattatgcagcggctggaa
gctgaaagaagagcaaggctacaggatgaagagcgcagacggcagcagcagttggaagag
atgcgaaaacgggaagcagaagacagagcccggcaagaagaagagcgcaggcgccaagag
gaggagcggacaaagcgagaggcagaacaaaagaggcgacaggaagaagaatattacaac
cgcttggaggctgaaaggcgccgtcagcatgatgaggcagaacggagattgctggaacct
gatgagcctggtctgtacagacctccgcttccacgggaatatgaattcccacccctgccc
ccttcatctaatgctcctcctcccccacctcaacgaaacacctcttacctcaaaacacag
gtcctctcccctgatacgatttacactgccaagtttgttgcatacaatgatgatgaggag
gaggaggattcctgcctagcaacaggtcaggataagtactccagtacaagaaagtcttat
ggtgaccttcctcctgccacccctaaaccacagcagccctcacgccagccacgcccagcc
tcagatggcatcttcctttccaactcattccagccatcctcggtcaatgccaacagtact
gcttacaaactgaaccatccccctcccctaccaaacaaaccaagtttcatcaaccccagc
aactcaaaaggatcaaactcttacactggatctactggagcaattgcaggatcacaggaa
tcctatctggacccaagagataaaaaatcaaaaagtcaagatggagatttacctggtgct
ccagaaaacttgactttccgggagcgacagagactattttcccaaggccaggatgtatcc
aataaagtaaaagcttctaggaaattaatggaactggaaaatgaattgaatacaaaatag
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