Eublepharis macularius (Leopard gecko): 129326081
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Entry
129326081 CDS
T09084
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
129326081 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129326081 (DDX3X)
03041 Spliceosome [BR:
emc03041
]
129326081 (DDX3X)
03036 Chromosome and associated proteins [BR:
emc03036
]
129326081 (DDX3X)
Enzymes [BR:
emc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129326081 (DDX3X)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129326081 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
129326081 (DDX3X)
Spliceosome [BR:
emc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129326081 (DDX3X)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129326081 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129326081
NCBI-ProteinID:
XP_054830163
UniProt:
A0AA97KU88
LinkDB
All DBs
Position
3:85867169..85887610
Genome browser
AA seq
740 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDAQSGGGTASKGRYIPPHLRNREASKQAGNAYNYTA
NYYSNPAAPPPRCYSPSWDSRGGNGYMNGYDRDSRMNGYDRDRGVFGSRGGSGRDDRGFD
GWNAGRDRDAYSSFGARNDRGSGKSSFFGDRGNGSRGRFDDRGRGSDCDGIGSRDRSGFG
RFERGGNSRWSDKCDEDDWSKPLPPSERTEQELFSGGNTGINFEKYDDIPVEATGSSCPP
HIESFSDVDMGEIIMGNIELTRYTRPTPVQKYAIPIIKEKRDLMACAQTGSGKTAAFLLP
ILSQIYTDGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSKVRP
CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF
EPQIRRIVEQDTMPPKGARQTMMFSATFPKEIQMLARDFLEEYIFLAVGRVGSTSENITQ
KVVWVEESDKRSFLLDLLNATGKDCLGEFQHNSNGSGKDSLTLVFVETKKGADSLEDFLY
HEGYACTSIHGDRSQRDREEALHQFRSGRSPILVATAVAARGLDISNVKHVINFDLPSDI
EEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEQHHKG
GSSRGRSKGRFSGGFGARDYRTSSSTAGSSFGSSRASSGRSGGGSGHGGNRGFGGGYGGF
YNSDGYGGNYNSQGVDWWGN
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcagtggaaaatgccctcggtctagatcagcagtttgctggtctagac
ttgaattcctcagatgctcagagtggagggggtacagcaagcaaaggccggtacattcct
cctcatttgcggaacagagaagcctcaaaacaggcaggaaatgcctataactatacggca
aactactattccaatccggcagcgccaccaccaagatgctattcccccagctgggactct
cgtggaggtaatggctatatgaatggatatgatcgtgacagccggatgaatggctacgat
cgtgatcgcggtgtgtttggatccagaggaggatctggacgtgatgacagaggatttgat
gggtggaatgctggaagagacagagatgcatacagtagttttggtgcaagaaatgaccgt
gggtcaggaaaatcaagcttctttggtgatcgtggaaacggctcaaggggacgatttgat
gatcgtggaagaggtagtgactgtgatggcattggcagtcgtgatagaagcggctttgga
aggtttgagcgtggtggaaacagtcgttggtctgacaaatgtgatgaagatgactggtcc
aaaccacttccaccaagtgaacgtacggaacaggagctgttctctggtgggaacactggc
attaattttgaaaaatatgatgacattccagttgaggcaacaggaagcagctgtcctcca
cacattgaaagtttcagtgatgttgacatgggggaaattatcatggggaacattgagctc
acccgctacactcgacctactccggtgcagaaatatgctatccctatcatcaaagagaag
agagatttgatggcttgtgctcagacagggtctgggaaaacagctgcatttcttttgcct
atactgagtcagatctatacagatggcccaggtgatgccctgagagctatgaaggaaaat
gggaggtatggacggcgtaagcagtacccaatctcattagtcttggctccaacaagagaa
ttagcagtgcagatatatgaagaagcgagaaagtttgcatatcgttccaaagttcgccct
tgtgttgtctatggtggtgctgacattggccaacagattcgtgacttggaacgtggctgc
catttacttgtagcaactcctggtcgtcttgtagatatgatggagagagggaaaattgga
ctggacttctgcaagtacttggtattggatgaagctgatcgtatgctcgacatggggttt
gaacctcaaattcgtcgtattgttgagcaagatactatgccaccgaagggtgcccgtcag
accatgatgttcagtgctacatttccaaaggaaatccagatgcttgctcgtgacttctta
gaagaatatatctttctggctgttggcagagttggctctacatctgagaacatcacacag
aaagtagtgtgggtggaagagtcagacaaacggtcatttctgcttgacctcctaaatgcc
acaggtaaagactgtttgggagaattccaacacaactctaatggctcaggcaaagattcc
ttgactttggtgtttgtggaaactaaaaagggagcagattccctggaagatttcctgtac
catgaaggatatgcttgtacgagtatccatggtgatcgctcccagcgagacagagaagag
gcattacaccaattccgttcgggcagaagtccaatcttggttgccactgcagtagctgca
agaggcctggatatttcaaacgtaaaacatgtcatcaactttgatttgccaagtgacata
gaagaatatgttcatcgcattggccgtacagggcgtgttgggaaccttggtctcgccaca
tcattcttcaatgaaaggaacataaatattacaaaagacttactagatctacttgttgaa
gctaagcaagaagtaccatcttggctagaaaacatggcatatgagcagcatcacaagggt
ggaagtagtcgtggccgatctaaaggccgtttcagtggaggatttggtgcccgagactat
cgaacaagtagcagtactgctggcagcagttttggtagcagccgtgcaagtagtggtcgg
agtggtggtggcagtggccatggaggcaacagagggtttggaggtggctatggcggcttc
tataacagtgatggatatggaggaaactataactctcagggggtagactggtggggcaac
tga
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