Eublepharis macularius (Leopard gecko): 129326361
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Entry
129326361 CDS
T09084
Symbol
XNDC1N
Name
(RefSeq) protein XNDC1N
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
emc04040
]
129326361 (XNDC1N)
Ion channels [BR:
emc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129326361 (XNDC1N)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
YVC1_C
Motif
Other DBs
NCBI-GeneID:
129326361
NCBI-ProteinID:
XP_054830492
UniProt:
A0AA97KV35
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All DBs
Position
3:complement(185013557..185060695)
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AA seq
1350 aa
AA seq
DB search
MGPVKIKHVVSFTSQDPKYPVDNLLLEESLRPWLSCPQDRSRLLKAELQLEQASHIGYVD
VGNCGSAFLQIDVGRSSWPADQSYLTLLPSTALMMPADAKLDKNRSGVRMFKEGDFLAMV
LAEKWDRIRLTCSQPFNKHTQFGLSFIRIRTPPDDSSSQADLPSLPAQAPPEPTGSPGLS
SAAFLRTFFPEVPSGSAEEAALQSRLQQLEPTASPGRRNPVCLSRPAQMVLKAAGARKRA
LPLVSSPSLPATESKDLPQLVEDEAQSHAASRSHENQEEEEIVPWDREVILLYVEFSSET
PSSDSGMSVDESHLVQKAGGLSPDASSWKGAWRAVLALLQNFQALCQPESAAGGPNGLPR
QRHLSVAASSVGPRLGSRRGGRGRGRKGRWQKVEGEKELGEEEEDGPEEAGVGVGTCPIC
DGRFPTSLLPAHASSCGEELEASSPSSCEELPDAGVCCPICQLRFPAAEAAVPQGAGGIS
LGGRMATEFEGIMQPNWKEIVNKKLKFPEGLLSAIQDGHLVKVQQLLQVSDGILRQLDDA
EDRAWREALNLAIRTGGEEATRTLLRYVKFDFRQVHEALLVAVDTNQPNVVKLLLDRLDQ
EKSLKMDIKSFSMAFFDNSIDNSRFAPGVTPLTLACEKDLYEIVDMLMKKGHAIPRPHKV
SCGCLECSNGRKYDLLKFSLSRINTYKGIASRAHLSIASEDAMLTAFKLSRELKRLSKKE
PEFKPEYLALEQLSQEFAFELLGMCRNQSEVTAVLNDLGDDEASGEDEELDEQAFEEGIP
NLARLRLAVNYNQKRFVAHPICQQVLSSIWCGSLQSWRGSTSLWKVFISCSIFVTMPILC
LIYWVAPKSKFGKMLKIPVIKFLLHSASYLWFLVFLLVESLVLEHHHEAFKGRNQSLWET
SLHMVWVAGFFWFECKEVWIEGMRSYLLDWWNFLDIVILSMYLASFVLRLLIFLKGHFYC
LDTSSSDECYYYTKAGRPEWHTEDPQFMAEVLFAVTSMLSFTRLAYILPAHETLGTLQIS
IGKMIDDMIRFMFILMIILTAFLCGMNNIYVHYQESERLGSFNETFQFLFWTMLGMEEHK
VVDMPQFFVAELVGRVLYGVFTIVMVVVLLNMLIAMITNSFQKIENDADVEWKFARSKLY
LSYFREGLTLPVPFNIIPTPKSVFYVIRGIFHFLCCYKPKRQQNYPPIPTITNPSLEDGG
LRSESRVSYRRQVLKALVQRYIDTARREFEESRRKDLGNRLTELNKSVLRLHSEMKHLRH
TVAANGAAANPLDGASVLRKYIMKVRNSFQSFDNDSGSSGQGSPAEVVVHQDGAIPEEEG
LGGEVGAEEKPPSAETELANEEKPAEEPEN
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgggtccagttaaaatcaaacatgttgtgtccttcacgtctcaggatcctaaatatcca
gtggacaacttgctgcttgaagaaagccttcgtccctggctcagttgcccccaggacagg
agccggctgctgaaagcagagttgcagttagaacaggcgagccacattggctacgttgac
gtagggaactgtggctctgccttccttcagatcgacgtggggcgctcctcttggcctgca
gaccagagttacctcaccttgttgccctccaccgccttgatgatgccagctgatgccaag
ctggacaagaatcgttccggggtccggatgtttaaagaaggggacttcttggcgatggtg
ctggctgagaagtgggatcgtatcaggctgacctgcagccaacccttcaacaagcacacc
cagttcggcctctcctttatccggatccgcactccgccagatgacagcagcagccaggca
gacctgccctccttacctgcccaggccccgcctgagcccacaggtagcccggggctctcc
agcgcagccttcctcaggacgttcttcccagaggtgccatcgggcagtgcagaggaagca
gcgctacaaagccgacttcagcagctggagcccaccgccagccctgggagacgcaatcca
gtctgtttgagccgcccagctcagatggtgctgaaggcggccggtgcccgcaaaagagcc
ttgcccctggtgagcagccccagccttcctgccacagagagcaaagacctgccccagctt
gtggaggacgaggcgcagagccatgcggcatcgcgatcgcatgaaaaccaggaggaggaa
gagatcgtgccgtgggatcgggaggtaattttgctctacgtggagttttcttccgagact
cccagttctgattcaggcatgtccgttgatgaatcccacctggtgcagaaagcagggggt
ctgagccctgatgcctcctcttggaagggagcttggagagcagtccttgcgctcctgcag
aacttccaggccctctgccagccagagagtgcagcaggtgggcccaatggactgcctcgg
cagcgtcacctgtccgtagcagcctcttccgttgggccaaggctgggttctcgaaggggg
ggaagaggccgaggtcggaagggacggtggcagaaggtggaaggggagaaagagctgggc
gaagaggaagaggatgggcccgaagaggcaggtgtgggggtgggcacgtgccccatctgt
gacggtcgtttccccaccagcctcctaccggctcatgcctccagctgcggagaggagctt
gaggcaagttctccctcctcgtgcgaagagctgccggacgccggggtctgctgccccatc
tgccagttgcgcttccctgctgccgaggctgcagttccacagggagcaggtggcatctct
ttggggggcaggatggcgacggaattcgagggcatcatgcaacccaactggaaggaaata
gtgaacaagaaattaaaattccccgaaggcctcctgagcgccattcaagatggccacctg
gtgaaagttcagcagctgcttcaggtgagcgacggcatcttgaggcagctggacgatgcg
gaggaccgagcctggcgggaggctctcaacttggccatccgcactggcggtgaggaagcc
acccggactttgctgcgctacgtcaagtttgacttccgccaggtccacgaggccttgttg
gtcgccgtggacaccaaccagcccaacgtcgtcaagctgttgctggaccggctcgaccag
gagaaaagcctcaagatggacatcaagtccttctcgatggccttctttgacaattccatc
gacaactcgcgcttcgcccctggcgtgactccgctcaccctggcttgtgagaaggacctc
tacgaaattgtggacatgttgatgaagaagggccacgccattccacgtccgcacaaggtc
tcctgcggctgcctggagtgctccaacggccgcaagtacgacctcctgaagttctcgctc
tcccgcatcaacacttacaagggaattgccagccgagcccacctctcgatcgccagcgag
gacgccatgctcaccgccttcaagctcagccgtgagctgaaacgcctctcaaagaaggag
cctgaattcaagcctgagtacctggccctggagcagctgagccaggagtttgctttcgag
ctgctggggatgtgccgcaaccagagcgaagtgacggccgtgctgaatgacctgggggac
gacgaggccagcggggaagacgaggagctggacgagcaggccttcgaggaggggatcccc
aacctggccaggctccggctggctgtcaactacaatcagaagcggtttgtcgcgcacccg
atctgccagcaagtgctgtcgtccatctggtgcgggagcctgcagagctggaggggcagc
accagcctctggaaggtcttcatctcctgctccatctttgtgacgatgccgatcttgtgc
ctcatctactgggtcgcccccaaatccaagtttggcaaaatgctgaagatccccgtgatc
aagttcctcttgcattcggcctcgtacctgtggttcctggtcttccttctagtggagtcc
ttggtcctggagcaccatcacgaggccttcaaggggaggaaccaaagcttgtgggagacc
tcgctgcacatggtgtgggtggcaggattcttctggttcgaatgcaaggaggtctggatc
gagggcatgcgcagctacctcctggactggtggaacttcctcgacatcgtcatcctcagc
atgtacttggcctccttcgtgctccggcttctgatcttcctcaagggccatttctactgc
ctggacaccagctcctccgacgagtgctactactacacgaaagcgggacgcccagagtgg
cacacagaggacccccagttcatggcagaggtgctcttcgctgtcacgagcatgctcagc
ttcacccgcctggcatacatcttgccggcccacgagaccctggggacgctgcagatctcc
atcggcaagatgattgatgacatgattcggttcatgttcatattgatgatcatcctgacg
gcattcttgtgcggcatgaacaatatctacgtccattaccaggagtctgaaaggctggga
agctttaacgagaccttccagttcctcttctggaccatgcttgggatggaggagcacaag
gtggtcgacatgccccagttcttcgtggccgagctggtggggagggtgctgtatggggtc
ttcaccatcgtgatggtggtggtccttctcaacatgctcattgccatgatcaccaactcc
ttccagaaaatcgagaacgatgctgacgtggagtggaaatttgcacgctccaagctctac
ctgtcctacttcagggaaggtctgacactgccggttcccttcaacatcatcccgacacca
aagtcggttttctacgtcatcaggggcatcttccacttcctgtgctgttacaaaccaaag
cggcaacagaactatcctccaattccaaccattaccaacccctccttggaagatggtggg
ctgcgtagcgagagccgtgtctcttaccggcggcaggtgctcaaggcgttggttcagcgg
tacattgacacggcccggagagagtttgaagagagcaggcggaaagatctgggcaaccga
ctcacggagctgaacaagtccgtgctgcgcctccactctgagatgaagcacctgcggcac
actgtggcggccaacggggcagccgccaaccccctggacggagccagcgtcctgcggaag
tacatcatgaaggtgcgcaacagcttccagagctttgacaatgactcgggcagttccggc
caggggtcccctgctgaggtggttgtgcaccaggatggagccatcccggaggaagagggc
ctgggaggggaggtgggggctgaggagaagccccccagtgctgaaacggagctggccaat
gaagagaagccagcagaggagccagagaactaa
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