Eublepharis macularius (Leopard gecko): 129326362
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Entry
129326362 CDS
T09084
Symbol
ATG16L2
Name
(RefSeq) protein Atg16l2
KO
K20868
autophagy-related protein 16-2
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129326362 (ATG16L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emc04131
]
129326362 (ATG16L2)
03029 Mitochondrial biogenesis [BR:
emc03029
]
129326362 (ATG16L2)
Membrane trafficking [BR:
emc04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
129326362 (ATG16L2)
Others
Specific organelles associated proteins
Auto phagosome
129326362 (ATG16L2)
Mitochondrial biogenesis [BR:
emc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129326362 (ATG16L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Gbeta
ATG16
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_SCAP
TAF1C_beta-prop
Beta-prop_VPS8
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
129326362
NCBI-ProteinID:
XP_054830493
UniProt:
A0AA97KUJ9
LinkDB
All DBs
Position
3:complement(186630822..186695268)
Genome browser
AA seq
609 aa
AA seq
DB search
MAERGGGGWKRHVLRQLQRRDRAQKARFRDLVQAYNKLLEKSCLLSTYKLQADSLDLQMG
LSARSALEPVDSAGGEVLDSAQVLERLKRNYEGHIGQLQRINVELTCEMIERNTLLEAKE
TALVEQRGRLASVSEQHSNLEAVHRQLKDQVEELTHKNSAVKADYDTLREHYRHQEMEFR
RAAERELELLRSVMRMKVEAAEHRNEKNERVKQARLSRELKKATRRPVGIEIEAGEGKAE
EQKMSGGAVPERESREKLWRRPFRSASATSMTLTRYVDAFKGLFDFRMKRGNSVSSSSVD
HYCCLPSCVAACLPSTVSDAKAAHLSEINAIKFSPNSGMVATGGADRLIKLWSVAGGRLE
HTQTLEGATGGITNLDFDPSGCHVLGASYNNVAQLWKIGDKKCREILTGHADKVTAAKFR
STRHQAVTGSRDRTVKEWDLCKGLSGSRTINVFSYCNDIACCDTVIVSGHHDKTIRFWDS
REPGCTQVIPVEGKVTSLSVSPDQMHLLSCSRDNALKVIDLRMHNIRQVFRAEGFKCGSD
WTKAVFSPDKSYALVGSADGTLFLWNMETGSLEKSLPGVHRSSVNAVAWGPSGMYIGSVD
QCQKLVLWR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggcggcggcggctggaagcggcacgtcctccggcagctgcagcggcgc
gaccgggcgcagaaggcgcgcttccgagacctggtgcaggcctataacaaactcttggaa
aaatcctgcttgctgagcacgtacaagctacaagcggactctttggacctacagatggga
ctatctgccagatcagccttggagcctgtggactccgcggggggtgaagtcttggactcg
gcccaagtgctggagcgcctgaaaaggaactacgaggggcacattgggcagctgcaaaga
atcaacgtggaactgacctgtgagatgatagaacggaacacactactcgaggcaaaggag
accgccctcgtggagcagaggggcaggttggcctccgtgagcgaacagcattccaacttg
gaggctgtgcatcggcagctgaaggaccaggtggaagagctgacccataagaacagtgcc
gtgaaggctgactacgacaccttgcgcgagcattaccggcaccaagaaatggagttccgt
cgggcagcggaaagagagctggagctgctcagaagtgtcatgcggatgaaggtggaggct
gctgaacatcggaacgagaagaacgagagggtaaagcaggccaggctgtccagggagctg
aagaaggccaccaggaggcctgtcggcattgagatagaagcgggagaagggaaggcagag
gagcagaagatgtccgggggagccgttcctgagcgggagagccgtgagaagctgtggaga
agacccttcagatctgcctccgccacctccatgaccctcaccagatatgtggatgctttc
aagggtttgtttgatttcaggatgaagcgtgggaattcggtcagcagttcttcagtggac
cactattgctgcctgccctcttgtgtagctgcctgcctcccctccacagtgagcgatgcc
aaggcagcccacctctctgagatcaacgccatcaagttcagccccaattcgggcatggtg
gccactggtggagcagacaggctgatcaaactgtggagcgtggctggaggtcgtctagag
cacacccagactttggaaggagctactgggggcatcaccaacctcgactttgacccatcg
ggatgccacgtgttaggtgcttcatacaacaacgttgctcagctgtggaagatcggagac
aagaaatgcagagaaatactcactggacatgcagacaaagtgactgcagctaagttcagg
tccacgcgacatcaggcggtgacgggcagccgagacaggacggtgaaggaatgggacctg
tgcaaggggttatcaggttccagaaccatcaacgtcttctcctattgcaatgatattgca
tgttgcgacaccgtcattgtcagcggacaccatgacaagacaatccggttctgggatagc
agggaacccggttgcacgcaggtgattcctgtggaaggcaaggtgacttccttgagtgtc
agccccgaccagatgcacttgctgagctgctcccgggacaacgcgctcaaagtcatcgat
ctacgaatgcacaacatccggcaagtgtttagggctgaaggattcaaatgcggctctgac
tggaccaaggctgtgttcagccctgataaaagctatgccttggtgggctctgctgacggc
actctcttcctctggaatatggagacaggcagcctggaaaagagcttgcccggagttcac
aggtcttcggtgaatgcagtggcctggggaccatccgggatgtacattggaagtgtggac
cagtgtcagaagctggtcctgtggagatag
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