Eublepharis macularius (Leopard gecko): 129326498
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Entry
129326498 CDS
T09084
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
emc03000
]
129326498 (SOX1)
Transcription factors [BR:
emc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129326498 (SOX1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129326498
NCBI-ProteinID:
XP_054830656
UniProt:
A0AA97KU96
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Position
3:45940332..45941498
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AA seq
388 aa
AA seq
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MYSMMMETDMHSPGGAPVATSLAGQTGAGGGGGGGGGGPKASQDRVKRPMNAFMVWSRGQ
RRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRK
TKTLLKKDKYSLAGGLLGAGGPGGGPPVPMGVGVSPAGVGQRLESPGGGGGGGGGGGGGG
GGGGGYPHMNGWANGAYPGSVAAAAAAAAMMQEAQLAYSQHPGGGAHPHAHAHHPHPHNP
QPMHRYDMGALQYSPISNSQGYMSASPSAYGGISYGAQPHQNSAAAAAAAAAAAAAASSG
ALGALGSLVKSEPSVSPPVTSAHSRAPCPGDLREMISMYLPGGEGGDPAAAAAAAAAAAA
AQSRLHSLPQHYQGASTGVNGTVPLTHI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagacggacatgcactcccccgggggagccccggtggccacc
agcctggcgggccagaccggagcggggggcggcggcggcggtggcggcggcggccccaag
gccagccaggaccgggtcaagaggcccatgaacgccttcatggtctggtcgcggggccag
cggcggaagatggcccaggagaaccccaagatgcacaactcggagatctccaagcgcctg
ggcgccgagtggaaggtcatgtccgaggccgagaagcgccccttcatcgacgaggccaag
cggctgcgggcgctgcacatgaaggagcacccggattataaataccggccgcggcgcaag
accaagacgttgctcaaaaaggacaagtactcgctggccggagggctgctgggcgccggc
ggccccgggggcggcccgccggtgcccatgggcgtgggggtcagccctgccggcgtgggc
cagcgcctggagagccccggtggcgggggcggcggaggcggcggcggcgggggaggcggc
gggggcggcgggggctacccgcacatgaacggctgggccaacggcgcctacccgggctcg
gtggcggcggcggcggcggcggcggcgatgatgcaggaggcgcagctcgcctacagccag
caccccggcggcggggcgcacccgcacgcccacgcgcaccacccgcacccgcacaacccg
cagcccatgcaccgctacgacatgggcgccctccagtacagccccatctccaactcgcag
ggctacatgagcgcctcgccctcggcctacggcggcatctcctacggcgcccagccccac
cagaactctgccgctgccgcggcggcggcggcagcagccgcggcggccgcctcgtcgggg
gcgctgggcgcgctcggctccctggtcaagtccgagcccagcgtcagcccgcccgtcacc
tcggcgcactcgcgggccccttgccccggcgacctgcgcgagatgatcagtatgtacttg
cctggcggcgaaggaggggacccggcggcggcagcggcggcggcggcggcggcggccgcg
gcccaaagccgcctgcactccttgccacaacactaccagggcgccagcacgggggtcaac
ggcacggtgcccttgacgcacatctag
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