Eublepharis macularius (Leopard gecko): 129326571
Help
Entry
129326571 CDS
T09084
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emc04121
]
129326571 (SHPRH)
Enzymes [BR:
emc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129326571 (SHPRH)
Ubiquitin system [BR:
emc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129326571 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
TPR_12
TRAF3_RING
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
129326571
NCBI-ProteinID:
XP_054830763
UniProt:
A0AA97KUS9
LinkDB
All DBs
Position
1:complement(125051119..125135961)
Genome browser
AA seq
1688 aa
AA seq
DB search
MSNRRKRAPPVRVNDEKKKQLCWNMHDDRKNEMTDLDAGDEEHPVAGTSSSSTSLIVIND
DSTDEDLTHKGNNLSSLSFSTVIDEAEDSCHLLTSLSIQLNIVISPYYPDPSWKALLGEM
VLQLLPEQLPAENFYKKSYTLMKAESRDHLCICVQARGIEKMDGREESFPSAYEEDMFVE
SSLSNEMLEDLMWLQKKSLIVLYQRPGDAQCLKVGIYLLEHGLSKLEFLSDGGGRIKKAN
QLIQKLMEKFYHFIIPDILEDEEEESDREIERQNIEELYDYVRHTHQKETEFLKENVQHS
ALIPVLRQYQSEAVNWMLQRENFRNVPTNENALHYLWREFITLDGIKLYYNPFTGCIIRE
HPVAGPQWPGGILADEMGLGKTVEVLALILTHSRKDVKQDALMLPEGFLVNFFVPPQPTE
GGEKKTIKKMELKSKKKVQYPSLRIMLLAAIKEMNVKKGASIFAIFKYVHAIYKYDIQRN
RRLLKRTLEKLIAEKAVEQVKGHGLAGSFKLGKNYKEQKVCNRSKKKGKSSNQIQENTFQ
KKKNETKELEDKGTSSADVIKSPLPAQDHDYCTTSKYNKSSKLDPKRWKADDTQDRPVDL
VSIDLPCNMLIPKDKACSVTDVPENSEEVDEQKEQQSPVSQGHASTFVQHPGSIFPFNTS
DYRFECICGELGLVDYKARVQCLNCHLWQHAECVNYKEENLKVKPFYCPHCIIAMKPVPT
GATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHILAEQEVVITTYDVL
RSELNYVDIPHSNSEDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECTTAKAAEMA
LRLSGINRWCVSGTPVQRGLEDLYGLVLFLGADPYWVKYWWDQLLYRPYCRKNPQPLYNF
IAKIMWRSAKKDVIDQIQIPAQTEDTHWLHFSPVERHFYHRQHEVCCQDALAKFRKISDW
SLKLSSLDRRTVASVLYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCRTE
CEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKEKLKTDSLQRLHSTHNL
MELLAAKHPGIPPTLRDGRLREEGEQLRQHYMSKSNAEVAEAHQALQPVVQTIHELQRKI
HSNSPWWLDVIQSAIQYAIDEELVQRVQNDLTSNYKQQTNKLSMADKFRDCRGLQYLLTT
QMEEVKKFQKLVRDAVKNLEGPPSKGVIEAATICHLRPVRLPLNNCVFCKADELFIEYES
KLFSHTVKGQMAIFEEMIEDEEGLVDDRLPTTSRGLWAASESERSLKSILSFAKAHRMDG
KIIEEGNIFLELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHPEEPKPNHP
VLHIIEPHEVEQNRVKLLNDKVVAKSQLQKKLGQLLYLTNLEKSQDKTTGGVNPEPCPIC
ARQLGKQWAVLTCGHCFCNECIAIIIEQYSVGSRRSSIKCAICRQTTSHKEISYVFTAES
ANQEDDMPVKGSHSTKVEAVVRTLKKIQYKDPGAKSLVFSTWQDVLDIIAKALYDNSMVF
AQINGINKFQENLSAFKYDPKINILLLPLHTGSNGLNIIEATHVLLVEPILNPAHELQAI
GRVHRIGQTKPTIVHRFLIKATIEERMQTMLKTVERSHSSSSMKQAEASVLTVADLADLF
SEETEGLE
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccgtagaaaacgtgctcctccagtgagggtgaatgatgagaaaaagaagcag
ctctgctggaatatgcatgatgaccggaaaaatgagatgacagatttagatgcaggggat
gaagaacaccctgttgcaggtacaagctcatcttctacatcccttattgttataaatgat
gatagcactgatgaagacttgactcataaaggaaataatctgtcatccttgagcttctca
acagttatagatgaagctgaggattcttgccatctcttaacttctttatcgatacaacta
aatatagtgatatccccatattatcctgatccttcttggaaggctttgcttggggagatg
gttcttcagcttcttcctgaacaacttccagcagagaatttctataaaaagagttatacc
ttgatgaaagcagaatctcgtgatcacctgtgtatctgtgtacaagcaagaggcattgag
aagatggatgggagagaagaatcgtttccaagtgcttatgaagaagatatgtttgttgaa
tcatctttaagtaatgaaatgttggaagacttgatgtggttgcaaaagaagagcctaatt
gtgctttatcaaagacctggagatgctcagtgcttaaaggttggaatatatcttctagaa
catggcttaagcaaactggaattccttagtgatggaggtggtagaataaagaaagccaac
caactcattcagaaactgatggaaaaattctaccatttcataattccagatatactggaa
gatgaggaggaggagtcagacagagagatagaacggcagaatattgaagagctttatgac
tatgtgaggcatactcatcagaaggaaacagagtttttgaaagaaaatgtacagcactct
gcattgattcctgtactaagacagtatcaaagtgaggctgtaaactggatgctgcagcga
gagaatttcagaaacgtacctactaatgaaaatgccctccactacttatggagagagttt
atcactttagatggaataaaactctactataatccttttactggctgcattatccgtgag
cacccagttgcagggcctcagtggcctggaggaatattggctgatgagatgggtcttggg
aaaacagtagaagtattggctcttatcctaacacactctcgaaaagatgttaaacaagat
gctctgatgttacctgagggtttcttggtaaatttctttgttccaccgcaacccactgaa
ggaggtgagaagaaaaccataaagaaaatggaacttaaatcaaagaagaaagtgcagtat
cctagcttgcgaataatgctcttagcagctataaaggaaatgaatgtaaagaagggagca
tccatttttgctatttttaagtatgtccatgctatatacaaatatgacatacagcgtaac
cgtcgacttcttaaaagaactttggaaaaactaattgcagaaaaggcagtagaacaggtc
aaaggccatggacttgcaggttctttcaagttgggcaagaactacaaagaacagaaggtt
tgcaatagatccaagaaaaagggaaaaagttcaaatcagatccaggaaaataccttccag
aagaagaaaaatgaaaccaaagaattggaagataagggcacatcctctgcagatgtcatt
aaatcacctcttccagcacaagaccatgattactgtacaaccagcaaatacaacaaaagt
tcaaaattggatccaaagagatggaaagctgacgatacccaggacagacctgttgaccta
gtgtctattgatttgccatgcaatatgctaattcccaaagacaaagcatgcagtgttact
gatgttcctgaaaactcagaggaagttgatgaacagaaagaacaacaatctccagtctcc
caaggacatgctagcacttttgtacaacatcctggttcaatttttcctttcaatacatct
gattaccgctttgaatgcatttgtggtgagcttggtttagtagactataaggcacgtgta
cagtgcctaaactgtcatctgtggcagcatgctgaatgtgtgaactataaagaagaaaat
ttgaaggtcaagccattttactgtccccattgcattatagcaatgaaaccagttcccaca
ggagcaactctgataatctctcctagttctatctgccaccagtgggtcgatgagatcaac
aggcatgtgagatcatcctcccttcgagttttggtttatcaaggagtgaagaaacatggt
tttctgcagcctcacatcttagcagagcaagaagtagtgattactacctatgatgtcctt
cgtagtgaattgaactatgtggacattccccacagcaatagtgaagatggccgccgtttc
agaaaccaaaagcgatatatggccatcccaagccccttggtagcagtggagtggtggcga
atttgtctggatgaagcacaaatggtagaatgcaccacagcaaaggctgcagaaatggct
ctccgtttgagtggaatcaatcgctggtgtgtaagcggtacacctgtgcagcgaggattg
gaagatctatatgggttagtgctttttcttggagctgatccttactgggtaaaatattgg
tgggatcagcttctgtatcgaccttactgcaggaagaacccccagcctctctacaacttc
atagccaagataatgtggaggtcagcaaagaaggacgtgattgaccaaattcagattcct
gctcagacagaagatacccactggcttcatttttctcctgtggagagacacttttatcac
cgtcagcatgaggtgtgctgccaggatgctctggcaaagtttagaaagatttctgattgg
tccctcaagcttagcagcctggataggaggacagttgcttctgttctgtatcctttgtta
cgcctgagacaggcctgctgtcatccacaagctgttcgtggagaattcttgcctctgcag
aaaagcacaatgactatggaggaacttcttacatcattgcagaaaaaatgtcggacagaa
tgtgaggaagcccacaggcaactcgtctgtgctctgaatggcttagctggtattcatata
attaaaggtgaatatgccctggcagcagaattgtatagagaggtgctacgttcctcggaa
gagcataaagaaaagctcaaaacagattcattgcagaggcttcattcaacacacaacctg
atggaactcttggcagcaaagcatcctggaataccccccaccttacgagatggcagactt
cgagaagagggtgaacaacttcgacagcattatatgagtaaatcaaatgcagaagttgct
gaagcccatcaggctttacaaccagtggtacagacaatccatgaacttcagaggaaaata
cattccaattcaccttggtggttggatgtgatccagtcagcaatacaatatgccattgat
gaagagcttgttcagcgggtgcaaaatgatctaacaagcaattataaacagcaaactaat
aaactctccatggcagacaaatttcgtgactgcagaggccttcagtatttgctcacaact
caaatggaagaagttaagaaattccagaaacttgtaagagatgctgtgaaaaatctggaa
ggtcctccttctaaaggtgttattgaggccgccaccatctgtcacctgcgccctgtaagg
ttgccactaaacaactgtgtcttttgtaaagctgatgaattatttatagaatacgagtca
aagctgttctctcacactgtaaaaggccagatggcaatttttgaggaaatgatagaagat
gaagaaggactagttgatgaccgcttacctaccacgagcagaggtctctgggcagcaagt
gaatcagagcgatccttgaaatccatactgtcttttgctaaagctcaccgaatggatggc
aagataattgaagaaggcaacatctttttggagctttttgaagcatggaaaaaggaatat
aagctgcttcatgaatactggatggtcctgagggatcatgtgtctgccattgatgaactc
gccatggccacagaacggcttagagtgcgtcatccagaagaaccaaaaccaaaccatcct
gttcttcacataattgagccacatgaggtagaacagaatagagtgaaacttttgaatgat
aaagtagttgccaaatcacagcttcagaagaaactgggccagcttctgtatctcactaat
ttagaaaagtctcaggataaaaccactggaggagttaatccagagccctgtccaatttgt
gcgcggcagcttggaaagcagtgggcagtactgacatgtggacactgtttctgtaatgag
tgcattgctattattatagaacaatatagtgttggctcccgcagaagttcaataaagtgt
gccatctgtaggcagacaacatcacataaagaaatctcctatgtcttcactgcagagtct
gcaaaccaagaggatgatatgcctgtgaagggtagtcattccaccaaagtcgaagcagta
gtcaggactctgaagaaaatccagtacaaagatccgggagccaaatcccttgttttctca
acgtggcaagatgtgctggatattattgcgaaagctctgtatgataacagcatggtattt
gctcagatcaacggaattaacaagttccaggaaaatctctcagcatttaaatatgatccc
aaaatcaacatattgttgttgcctcttcatactggttccaatgggttaaacatcattgaa
gcaactcacgtcctcttggtggaacctatactaaatccagcacatgagctacaggctatt
ggcagagtgcatcgtattgggcaaacgaaacccaccatcgttcacagattcttaataaaa
gcaacaatagaagagagaatgcagacaatgctgaaaaccgtagagagaagccattccagt
tcttccatgaagcaggcagaagcttccgtgttaacagttgctgatttggcagaccttttc
tcagaagaaactgaaggacttgagtga
DBGET
integrated database retrieval system
