Eublepharis macularius (Leopard gecko): 129326612
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Entry
129326612 CDS
T09084
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emc03021
]
129326612 (SCAF4)
03041 Spliceosome [BR:
emc03041
]
129326612 (SCAF4)
Transcription machinery [BR:
emc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129326612 (SCAF4)
Spliceosome [BR:
emc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
129326612 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
XMAP215_CLASP_TOG
Motif
Other DBs
NCBI-GeneID:
129326612
NCBI-ProteinID:
XP_054830834
UniProt:
A0AA97J475
LinkDB
All DBs
Position
3:100026844..100115822
Genome browser
AA seq
1072 aa
AA seq
DB search
MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFCKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSSAASVSEDATNNEGSPPPATAVPSELPQVSSNSVPTVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPAKPQSPVIDNNMMAQVQAITAQLQTTTTQP
SEQKHDFPASEQKTSFDKKLLDRFDYDDEPEAVEESKKEDSSPSPSVSQQAFGFPGEGIQ
QPVYPQLPNIDQFQQRMLGVQQDPMHHQVPLPPNGQMPSYGLLPTPQFPPMAQPVIQPSP
QVQPSFQSSFTVQSESHIQKAQQQEMEVDQPPAQEAKRHESRKSRSRSASRSPKRRRSRS
GSRTRRSRHRRSRSRSRDRRRHSPRSRSQERRERERERERRAKGLPPIKPETVSVCSTTL
WVGQLDKRTSQQDVGGLLEEFGPIESINMIPPRGCAYIVMVQRHDAYRALQKLSRGNSKV
NQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWGKVKPEDLESSCEGGMLDNETLSPEW
KGIPKKSENQVAQNGGAVGEIAHNEQTSPVAKTLPVQMPVPIPAPITVPPPQVPPHQPGP
PMVGTLQPPTFTPPLGIPPPGFGPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPINPP
VSVPPVSVPPSPGVNIPNSTVANINEDTTKDSSVGNPIPTVVSGSRGNAENTDSSKGYPN
APPPATSTSIPTPVTQPVPLLGTQGVTPTPVIGLQTPSTGLLGARPGLIPLHRPPGMPPP
HLQRFPMMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKGPFPPPGHFVRPGGGPGGPEDN
RDGRQFRNDRQPPFNPNRDQERFGRRSFGNRIENERDRYGNRNDDREHERLGNRDRREWG
RRSPERDRHRDLEERNRRFSGQRERDSRDRESRREKDENRGKEKSELTDRVDGVKNHESQ
SGKVENTDTISELKKGESEPTAAKSAEELTSETTSSLEQPEESSSSVVEAPR
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtaaacgccttcaaccaggagctcttctcattgatggagatgaagcctcct
atttctcgtgcaaagatgattctcattactaaagctgccattaaagctattaagctttac
aagcatgtagtccagattgtagagaagtttattaaaaagtgtaaaccagaatataaagtt
cctggattgtatgttattgactctatcgttcgtcagtctcgtcatcaatttggaacagat
aaggatgttttcgggccaagattctgtaaaaatataactgctacattccagtatttatat
ctctgtccatcggaagacaagagtaagatagttcgtgtcctcaacttatggcagaaaaat
ggagtgtttaaaatagaaataattcagcctctcctggacatggcagcaggaactagcagt
gcagcttcagtgtcagaagatgccactaataatgaaggttcaccacctcctgctacagca
gttccatctgagcttccccaagtttcttctaattcagtacctactgtgccacaattgccc
agttcagatgcctttgcagctgtagctcagttatttcagactacacaaggacagcagctc
caacagattcttcagacttttcagcagcctgcaaaacctcagtctccagtgatagataac
aacatgatggctcaggtccaagcaattactgcacagttgcagactacaacaacacagccc
tcagaacaaaaacatgatttcccagcatcagagcaaaagacatcttttgataagaagctg
ctagatcgatttgactatgatgatgagccagaagcggtagaagagtcaaagaaagaggat
tcatcaccttctccttcagtctctcagcaagcatttggatttccaggtgaaggcatacag
cagccagtttatccacaactcccaaatatagatcagtttcagcagcgaatgctgggagtg
caacaggatcctatgcaccaccaggtcccactccctccaaacggtcaaatgccgagctat
ggacttctacctacaccacagtttcctcccatggctcagcctgtgatccagccttctccc
caagtgcagccatcttttcaatcttcttttacagtacaaagtgaatcccatatacagaaa
gcacagcagcaggaaatggaagtggatcaacctcctgctcaagaagcaaagaggcatgaa
agcagaaagtcaaggtctagatccgcatcaagatcacccaaaaggagaagatcaaggtct
ggttctcggactcgaagatcacgccatcgtcgttctcgttcccgatctcgggacaggcgc
cgccattctcctaggtctcgatcccaggaaaggcgtgaaagagagagagaaagagagcgc
agagcaaaaggcctacctccaatcaaaccagaaactgttagtgtttgcagtactacactt
tgggtaggacaactagacaaacgaacatcacagcaggatgttggtggtcttctagaagag
tttggcccaattgaatctattaatatgataccaccaagaggatgtgcctatattgtaatg
gtgcagagacatgatgcataccgcgccttgcaaaaactcagccgtggaaactctaaagtc
aatcagaaatctataaagattgcatgggctttaaataaaggaattaaaccggactataag
cagtattgggatgtagaattaggtgttacctacattccatggggtaaagttaagcctgaa
gacctggaaagttcttgtgaaggaggaatgttggacaatgaaacacttagtcctgaatgg
aaaggaattcctaaaaaatcagaaaaccaagtcgcccagaatggaggagcagtaggtgaa
atagcacacaatgaacaaacatcacctgtagctaaaactttaccagttcagatgcctgtt
cccatacctgctccaataacagtgcctccaccacaagttccaccacatcagccaggtcct
ccaatggttggtactcttcagccgcctacatttacccctcccttaggaattccgcctcct
ggatttggacctggagttcctccacccccacctccaccatttttgcgtcctggtttcaac
ccaatgcatttacctccaggatttctgcctcctggaccaccaccacctattaatcctcca
gtttcagttcctccagtctccgttcctccttcacctggagttaatatcccaaattctact
gtggccaatataaatgaagacactacaaaagactcttctgtgggaaaccctattccaaca
gtagtttctgggtctagaggaaatgctgaaaatacagatagttccaaaggatatccaaat
gctcctccacctgcaacttcaactagcataccaactcctgtcacccaacctgtcccactc
cttggtactcaaggagttacacctactccagtgattggattacagacaccttctactggt
cttcttggtgcacgacctggtttgataccactccatcgaccaccaggaatgccaccgcct
catctgcagagatttccaatgatgccacctcgacatatgcccccccatatgatgcacaga
ggtccacctccaggcccaggaggctttgggatgcctccacctcatgggatgaagggtcct
ttcccaccacctggtcactttgtgaggcctggaggggggccaggtggacctgaagataac
agagatggaaggcaatttaggaatgatagacagccacccttcaatccaaacagagaccag
gaaagatttggaaggaggtcttttggaaatcgaatagaaaatgagcgtgatcgctatggt
aaccgcaatgacgatagagaacatgagcgccttggtaatcgagacaggagagaatgggga
agaagaagccctgaacgtgatagacacagagacctggaggaaagaaacaggcgtttcagt
ggacaaagagagagagattctagggatagggagtctcgcagagaaaaggacgaaaatcga
ggaaaggagaaatccgaactgacagatagggtagatggtgtcaaaaaccacgaatcccag
agtggcaaagtagaaaacacagacaccatttcagaacttaaaaagggggagtctgaaccc
acagctgcaaagtctgctgaagagttaacatctgagactacctcatctcttgaacaacct
gaagagtcttctagttcagttgtagaggcaccccgctag
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