KEGG   Eublepharis macularius (Leopard gecko): 129326884
Entry
129326884         CDS       T09084                                 
Symbol
SF3B6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129326884 (SF3B6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:emc03041]
    129326884 (SF3B6)
Spliceosome [BR:emc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    129326884 (SF3B6)
 Complex B
    129326884 (SF3B6)
 Complex C
   U2 SnRNP specific factors
    129326884 (SF3B6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 129326884
NCBI-ProteinID: XP_054831187
UniProt: A0AA97J4C7
LinkDB
Position
1:38382845..38389868
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcgatgcaagcggcgaaacgcgcgaacattcgccttccccctgaagtcaaccgaatt
ttgtatatcaggaatttgccgtataaaatcacagcggaagaaatgtatgatatttttgga
aaatacggacctattcgacaaatcagagtaggaaatactcctgagactagaggaacagcc
tatgttgtctatgaagatatctttgatgccaaaaatgcatgtgatcatctgtcaggattc
aacgtgtgcaacagataccttgtggtgttgtactataacgcaaacagggcattccaaaaa
atggatacaaagaaaaaggaagaacagctgaaactcctgaaggagaaatatggaataaac
acagacccaccaaaataa

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