Eublepharis macularius (Leopard gecko): 129327229
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Entry
129327229 CDS
T09084
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04137
Mitophagy - animal
emc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129327229
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129327229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129327229
03009 Ribosome biogenesis [BR:
emc03009
]
129327229
04131 Membrane trafficking [BR:
emc04131
]
129327229
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emc04147
]
129327229
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129327229
Ribosome biogenesis [BR:
emc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
129327229
Membrane trafficking [BR:
emc04131
]
SNARE
SNARE associated proteins
Others
129327229
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129327229
Exosome [BR:
emc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129327229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
CDC48_2
AAA_22
AAA_33
AAA_2
TIP49
RNA_helicase
AAA_14
AAA_28
NPHP3_N
Vps4_C
nSTAND3
Mg_chelatase
AAA_17
Parvo_NS1
ATPase
ATPase_2
AAA_18
AAA_7
ABC_tran
DUF815
IstB_IS21
AAA_24
NB-ARC
TsaE
ResIII
Sigma54_activat
Viral_helicase1
nSTAND_NTPase5
NACHT
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
129327229
NCBI-ProteinID:
XP_054831690
UniProt:
A0AA97J5Z7
LinkDB
All DBs
Position
4:complement(47253591..47272340)
Genome browser
AA seq
807 aa
AA seq
DB search
MPATGGDPKGEDYSTAILRQKHRPNRLIVDEAANEDNSIVCLSQAKMEELHLFRGDTVLL
KGKKRRETVCIVLTDDSCQSEKIRMNRVTRNNLRVRLGDVVSVQACPDVKYGKRIHVLPI
DDTIEGMTGNLFEVYLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVEVDPTPHCIVAPD
TIIHCEGEPIKREDEEESLNDVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR
GILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA
IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSIDPALRR
FGRFDREIDIGIPDSVGRLEILQIHTKNMKLADDVDLERVANETHGHVGADLAALCSEAA
LQAIRKKMNVIDLEDDTIDADILNSMAVTMDDFQWALGQSNPSALRETVVEVPQVSWDDI
GGLQEVKRELQELVQFPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANF
VSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDGGGAADR
VINQILTEMDGMTNKKTVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILQA
NLRKSPVAKDVDLNYLAKITHGFSGADLTEICQRACKLAIREAIEMEIKTERERQRHKYA
AMDDDYDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPAGNQN
SGGTGSSGSNSGQGSLFQEEGDDDLYN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccacgggaggagaccccaaaggagaggactattccactgctatcctgcgccag
aagcatcgtccgaaccgtctcattgtcgatgaagctgccaatgaagacaacagtattgtg
tgcctgtctcaggccaaaatggaggaactgcacttgttccgtggggacacagtgctgctg
aaaggaaagaaacgtcgagagacagtgtgtatcgtactgacagatgactcttgccagagt
gagaagattcgcatgaaccgtgtaacccgcaacaacctgcgtgtgcgccttggagatgtg
gtcagtgtccaggcctgtccagatgttaagtatggaaaacggatccatgtactaccaatt
gatgacaccattgaaggcatgacagggaacctctttgaagtttacctcaagccctacttt
ctggaggcttatcgacctgtgcacaaaggtgacatttttctggtgcgaggtggaatgagg
gctgtggagtttaaggttgttgaggtggatcccactccacactgcatcgtggctcctgac
accattatccactgtgagggagagcccatcaaacgagaggatgaagaggagagcctcaat
gatgttggctatgatgatattggaggctgtcgtaaacaactggctcagattaaggagatg
gtggagctcccattgagacacccggcactcttcaaagctatcggtgtgaagcctccacga
gggattctcctttatggtcctcctggtactgggaaaacacttgtggcccgggctgttgca
aatgaaactggcgcctttttctttcttatcaatggcccagaaattatgagcaaattagct
ggggagtcagagagcaacttgcgcaaagcattcgaggaagctgagaagaacgctccagcc
atcatttttattgatgagctggatgccattgctcctaagagggagaagacacatggggaa
gtggagcgccgcattgtttctcagctcctcactctcatggatggcctgaagcagcgctca
cacgtgatagtcatggctgccaccaatcgacccaacagtatcgatcctgccctgcgtcgg
ttcgggcgttttgaccgagaaattgacattgggatcccagattcggtgggaaggttggaa
attttgcagattcacaccaagaacatgaaactggctgatgatgtggatctggaaagggtt
gccaatgagacacatgggcatgtgggtgctgatttggcagcgttgtgctctgaggcagca
ctccaggcgatccggaagaagatgaacgtcatcgacctggaagacgacactattgatgct
gacatccttaactccatggctgtcaccatggatgacttccagtgggctcttggccagagt
aacccctcggcactacgtgagactgtagtggaagtgccacaagtctcctgggatgatatt
gggggtcttcaggaagtcaaacgtgagctgcaggaactggtgcagttcccagtggagtat
cctgacaagttcctgaagtttgggatgacgccatcaagaggtgttctcttctacggaccg
cctggctgtggcaagaccctgctggccaaggccattgccaatgagtgccaagccaacttt
gtctccatcaagggtcctgagctgctcactatgtggtttggagaaagtgaggctaacgtc
cgtgatgtttttgacaaggcccggcaggcagctccctgtatcctgttttttgatgaactg
gactctattgcgaaggcacggggtggtggagctggggatggcggaggtgcggctgaccgt
gttatcaatcagatcctcactgagatggatggcatgaccaacaagaagacagttttcatt
attggtgccaccaatagaccagacatcattgacccagccattctacgtccagggcgtttg
gaccagctcatttacatcccattgcctgatgagaagtctcgtgtggctatcctccaagcc
aatctgcgtaaatcacctgttgccaaggatgtggacttgaattatctggctaaaatcaca
cacggcttctcgggtgcagacctcactgaaatctgccaacgtgcctgcaagcttgccatc
cgtgaggctattgagatggagatcaagacagaacgggaacgccagcgtcacaaatacgct
gccatggatgatgattatgatcctgtgccagagatccgccgtgatcattttgaggaagcg
atgcgctttgcacgccgctcagtcagtgataatgacatacgcaagtatgagatgtttgcc
cagacattacagcaaagccgaggcttcggtaacttcaggttcccagcaggaaaccagaac
agtggtgggacaggcagcagtggaagcaacagcggccaagggagccttttccaggaagag
ggggatgacgatctctacaactga
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