Eublepharis macularius (Leopard gecko): 129327312
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Entry
129327312 CDS
T09084
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129327312 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emc03021
]
129327312 (SMARCC2)
03036 Chromosome and associated proteins [BR:
emc03036
]
129327312 (SMARCC2)
Transcription machinery [BR:
emc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129327312 (SMARCC2)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129327312 (SMARCC2)
PBAF complex
129327312 (SMARCC2)
GBAF(ncBAF) complex
129327312 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
BRCT_2
CD99L2
Motif
Other DBs
NCBI-GeneID:
129327312
NCBI-ProteinID:
XP_054831812
UniProt:
A0AA97KWG7
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Position
4:11421005..11469022
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AA seq
1280 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDSARVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLHPDIDPKLQAKLKDIIKRHQGTVTEDKNNASHIVFP
VPGSLEEDCTHTEEWVRPIMKRDKQVLLHWGYYPDSYDTWIPASEIEAPVEDAPTVEKPR
KVHAKWILDTDTFNEWMNEEDYEVNDEKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGN
YKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEV
TLPKTVNTKKDSESAPVKGGTMTDLDEPEDESMETAGKDEEENNAGNKGEQTKNPDLHED
NVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRL
NPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLA
DTPSGLVPLQPKTPQGRQSDSDTKTGRKSKEIEDLVTETVKGKPEMQTTASQQMLNFPDK
SKEKPPDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVS
EHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVV
DPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTT
SDELERIGEGGERGAFRASTREAPSLDLAQCAVGTKKGAETQETRAGLASGLELTLNRLA
QEESCTDENRAEPQPSEEKKEVKEPREGSLEEEVKEKLGEVPRKEEDKNKEADGEKEMDK
NDGDALADGDKEKEAKDGQEEGPKDLAEIEGERKAKVERDIGEGNLSTAAAAALAAAAVK
AKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQ
AFHMEQLKYAEMRARQQHFQQMHQQQQQQQPPPSLSAGSQPLPSSGAPLAPAAHSMPISQ
TPVPAATSVGQPSGLAQTEQIGQPVTVQSQPAGAGAPQIGPGQIGPPSAGSHAQPPFPSQ
QPSSQILPGTVPATVHPAMAGNIPSALPFGMPASIPFSMASNVTDSIGINFPANMPIHPV
HGNLACSMANPPIINVSSTLHPTAAPPPLSSAAAQSPAIVAAMQGSLLPNAGLGSDQGPS
LQPDPIAPSPSTATPVPPPQ
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggcctcggacacc
gtcagccagttcgacagcgcgcgcgtctggctgggcaagaactacaagaagtacatccaa
gcagaaccacccaccaataagtcgttgtccagtctagtggtgcagctgttgcagttccaa
gaggaggtgtttgggaaacatgtcagtaatgcgccgctcacaaagttgccgatcaaatgc
ttcttagatttcaaagctggtggtgctctctgtcacatcctcgcagcagcctataaattc
aagagtgaccaaggatggcggcgtttcgatttccagaatccatcccggatggatcgcaat
gtggagatgttcatgaccattgaaaaatctctagtgcagaacaattgcctctcacgacct
aacatctttttgcatccagacatcgaccctaaattgcaagcgaaactgaaagacatcatc
aaacggcaccagggaacagtaactgaagataagaacaatgcttcccatattgtctttcct
gttcctggtagcctggaggaagattgtacgcatacagaagagtgggttcggcccatcatg
aagagggacaaacaggttcttctgcactggggttactatcctgacagctatgacacttgg
atcccagcaagtgaaattgaggcccctgtagaggatgctccaacagtggagaagccccga
aaggtccatgccaagtggatcctagacacggataccttcaatgagtggatgaatgaagaa
gactacgaggtgaacgatgagaagaaccccgtctcccgtaggaagaaaatttctgcaaag
actctcacagatgaggtgaacagccccgactcagaccggcgagacaagaaaggagggaac
tataagaaaaggaagcgttctccctccccttcacctactccagaagctaaaaagaagaat
gccaagaaagggccttccactccctacaccaaatccaagcgtggccaccgggaagaggag
caagaagacctcacaaaagacatggatgagccttcccctgtccccaatgtcgaagaagtc
accctaccaaaaacagtgaacaccaagaaagactctgaatctgctcctgtgaagggcggc
actatgactgatttggatgaaccggaggatgagagcatggagactgcagggaaggatgaa
gaagagaacaatgctggcaacaaaggagagcagacaaagaaccccgaccttcatgaagat
aatgtgacagaacagacccatcacattatcatccccagttacgcagcctggttcgactat
aacagtgttcatgccattgagcgaagagccctcccagaatttttcaacggcaagaacaag
tccaagactccagaaatctacttggcataccgcaatttcatgattgacacgtaccggctc
aatccacaggagtatctaacctcaactgcctgccgccggaatctggccggagatgtctgt
gccatcatgagggtccatgccttcctggagcagtggggactcataaattaccaagtggat
gctgagagccggccgactccaatgggaccaccacccacatctcatttccatgttctggct
gacactccttcagggctggtgccgctgcagcctaagacaccccagggccgtcagagtgac
agcgacaccaagactggtcggaagagtaaggagatcgaagacctcgtcacagagacagtg
aaagggaaacctgaaatgcagaccacagcttcccagcagatgttgaacttccctgacaag
agcaaggagaagcccccagacatgcaaaactttggtctgcgtactgacatgtacaccaag
aagaatgtcccctccaagagcaaagctgcggccagcgcaacccgtgagtggacagagcag
gagacgctgctgctgctggaggccttggagatgtacaaggatgactggaacaaggtttct
gagcatgttggcagccgcacccaagacgagtgcatcctacacttcctgcgtctccccatt
gaggacccttacctggaggactcggaggcgtctctggggccccttgcctaccagcccatc
cccttcagccagtcaggcaaccctgtcatgagcacagtggctttcctggcgtctgtcgtg
gaccctcgtgtggcatctgcggctgccaagtcggccctagaggaattctccaagatgaag
gaagaggtgcctacagccttggttgaagctcacgttcgcaaggtggaggaagccgccaag
gtgacaggcaaggcagacccggcatttgggctggagagcagcggaattgcagggaccaca
tccgatgagctggagagaataggtgaggggggcgagcggggcgccttccgcgcttccacc
cgtgaagcgccctcgttggacctcgcccagtgtgcggtggggactaagaagggtgccgag
acgcaagagaccagagccggcctggcttccggcctggagctcacactcaatcgcctggca
caggaagagagctgcacagatgagaaccgagcagagccccagccttcagaggagaagaaa
gaggtgaaggagccaagagaaggatccctggaggaggaagtgaaagagaaacttggagaa
gtgcctaggaaagaggaggacaaaaacaaagaggctgatggagagaaggaaatggacaag
aacgatggggatgccttggctgatggagacaaggagaaagaggccaaggatggccaggaa
gaggggcccaaggaccttgctgagattgagggtgaacggaaagccaaggtggagagggac
atcggtgaaggtaacctctccaccgcggcagccgctgctctggctgctgctgcagtaaag
gcaaagcacttggcagcagtggaggagcgtaagatcaagtccctggtggccttgctagtg
gagacacagatgaagaagcttgagatcaagttgaggcactttgaggagctggagaccatc
atggatcgggagcgcgaggcactagagtaccagagacagcagcttctggctgaccggcag
gccttccacatggagcagcttaaatacgctgagatgcgtgcgcgccagcaacatttccag
caaatgcaccagcagcagcagcagcagcagccgcccccttccctctctgctggctctcag
cccctcccatcctcgggggctcccctggcaccagctgcacactccatgcccatctcccaa
acacctgtgccagctgccacctccgtaggccagcccagcggcctggctcagacagaacag
attggacagcctgtgacagtccagtcacagccagcgggagctggagcaccacagataggg
cctggacaaattggaccaccttctgcaggttctcatgcccagccaccgttccctagccag
cagccatcgtcccagattctccctgggacagtcccagcaaccgttcaccctgccatggct
ggtaatatcccctccgctctgccttttggaatgcctgcctccatcccatttagcatggct
agtaatgtaacagactccatcggcattaacttccctgctaacatgcccatccatccagtg
catggtaaccttgcgtgcagcatggctaatccgcccatcatcaacgtctctagcaccctg
caccctactgctgccccgccgcccctcagctccgcggctgcccagagcccagctatcgtg
gcggccatgcagggcagcctccttccaaatgctggtcttggatcagatcaaggaccttcg
ctgcagccagaccccatcgctcccagccccagcacggccacgccagtcccacccccacag
tga
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