Eublepharis macularius (Leopard gecko): 129327378
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Entry
129327378 CDS
T09084
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03440
Homologous recombination
emc03450
Non-homologous end-joining
emc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129327378 (RAD50)
03450 Non-homologous end-joining
129327378 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
129327378 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emc03032
]
129327378 (RAD50)
03400 DNA repair and recombination proteins [BR:
emc03400
]
129327378 (RAD50)
DNA replication proteins [BR:
emc03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
129327378 (RAD50)
DNA repair and recombination proteins [BR:
emc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
129327378 (RAD50)
BRCA1-C complex
129327378 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
129327378 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
AAA_29
AAA_24
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
129327378
NCBI-ProteinID:
XP_054831940
UniProt:
A0AA97J5G8
LinkDB
All DBs
Position
4:complement(69432597..69486161)
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIDKMSILGVRSFGVEDKDKQVITFLNPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TQGKSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQGQQVKVCLETLKFLKQNKEKAHEIQSHLTNRETQLAASREN
VRSIENQLEPLKNRLTEIERNLVKVMRLDNEIKALESRKKQMEKDNQDLQQKMEKVFQGT
DEQLRDMYQNHQKTVREKEKRLTECQRELERANKECQRFNREKSELLIEQGRLQLQADRH
QQHIRTRDSLIQSLAVQLELEGFERAPFNERQINSFHRLVKERQDKDTDAANQLMREFGE
KEMMKQTQLDEIRDKKTGLERTIDLKTDIQNKKQLEVKNLKHELRQLEGSSDRLLELDQE
LAKAKRELEEAEKNSNVEGLEMEIQELQREKANLDSILRKLDKEMEQLNLNTAIITQMDM
LKKDKADKEEQIRKIKSRHSEELISLLGYFPNKRQLEDWLHSKVREINQTRDKLAKLNKE
LVSAEQNKSHISNELRKKEEQLTNYEEKLFNVCGSQDFESDLHKLEEEIEKTSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCRRVFQTEADLQDVISDLQSKLRLAPDKLKSTESELK
RREKRRDEMIGLKPVRQTVDDLKEKDIPDLRNRLQTVNRDIQRLKGDLEEQETLLGTIMP
EEESAKACLQDITLMERYQTDLRDVERKIAQQATKLQGIDLGRTLLQVSQEKQEKKHQWD
TVTGKIELKQNLKQDQQNQVQHLKSTVNELKAEKLQISSCMQRRQQLEEQTVELTTEVQS
LNREIKEAKEQIFPLGATLKKLQEEKEELMNKKNTSYKMMQEKINDVKEKVKNIHNFVKE
VENYIQEGKEEYKQQKESELDEVKDQLVECEKKKEKINKEMGTIRQDIDTQKIQERWLED
NLTLRKRNEDLKEVEDNIKQYLKEMGELQVPQLKKDQQHLEEKIEDLKRNHSLALGRQHG
FEEEILRFKKELRDPQFKDAEEEYRKKMIVMRTTELANKDLDIYYKALDHAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENASASVKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAESFCLNCGILALDEPTTNLDRENIESLAHALVEIIKNRSQQS
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNLDQCSEIVKCSVTSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggattgataaaatgagcatccttggcgtaaggagttttggggtcgaggacaaa
gacaagcaagtgatcactttcttgaatcctttaacaatcttggtggggccgaatggtgct
ggaaaaacgactattatagaatgtctcaagtatatttgtactggggattttccacctggc
acccaaggaaaatcatttgttcatgatcctaaggttgccaatgaaacagatgtgagggct
caaattcgacttcagtttcgtgatgttaatggagagcttgtagctgtccagcgatccatg
gtatgcactcagaaaggaaagaaaacagaatttaaaactcttgaaggagtcataacaaga
acaaaacatggagagaaggtcagtctgagctctaaatgtgcagaaattgaccgagagatg
atcagcgcccttggtgtttccaagtctgtgattaataatgtcatcttctgccatcaagaa
gaatccaactggccattaagtgaaggaaaggctctgaaacaaaaattcgatgaaatcttt
tcagcaaccaggtacattaaagcactggaaacacttcgtcaagttcgcttaaagcaaggt
caacaagttaaagtgtgcctggagacactgaagtttctaaaacagaataaagaaaaggct
catgaaattcagagtcatcttactaatagggaaactcaactggcagcatcaagggaaaat
gttagatctattgagaaccaacttgaacctctaaagaatcgtctcacagaaatagaacgt
aatcttgtaaaagtaatgagacttgataatgaaattaaagctctggaaagcaggaaaaaa
cagatggaaaaggataatcaagatttgcaacaaaagatggagaaggtttttcaaggaact
gatgaacagcttagagatatgtatcaaaaccaccagaaaactgtgagagaaaaagagaag
agattaacagaatgtcagagagaactggagagggcaaataaagaatgccaaagattcaac
agagaaaaatcagaactattaattgaacaaggtcgtcttcagctgcaagcagatcgtcac
cagcagcatattagaaccagggattcgttaattcagtccttggctgttcagctggaactg
gaaggatttgaaagagcaccttttaatgaaagacagataaacagttttcacaggcttgtc
aaggagagacaggacaaagacactgatgcagctaatcagctgatgagagaatttggagag
aaggaaatgatgaagcaaacgcaattagatgaaataagggataaaaagactggacttgaa
agaactattgacctcaaaacagacattcaaaataagaagcaacttgaagtgaagaacttg
aaacatgaactgcgccagcttgaagggtcctcagataggcttctggaactggatcaggaa
cttgccaaagcaaaacgtgaattagaagaagctgaaaagaatagcaatgtagaaggcctg
gaaatggaaatacaagagttacaaagagagaaggcaaatttagacagcattcttcggaaa
ctggataaagaaatggagcagttgaacttgaatactgcaataataacccaaatggacatg
ctgaagaaagataaagctgacaaggaggaacagattagaaaaatcaaatcaagacacagt
gaagagttaatctccttactgggatattttccaaataaaagacagcttgaagattggctt
cactctaaagtgagagagattaatcagacaagagacaaacttgccaagcttaacaaagaa
cttgtttcagctgaacaaaacaaaagtcatattagcaatgaactcagaaaaaaagaggaa
cagttaaccaactatgaagaaaagctctttaatgtttgtggaagtcaggattttgaaagt
gatctccacaagcttgaagaggaaatcgaaaaaacctccaagcaacgagccatgcttgca
ggagccacagcagtttattcgcagttcattacccagttaacagatgagaatcagtcatgt
tgtccagtctgtcggagagtctttcaaacagaggctgatctgcaggatgtgataagtgac
cttcagtctaagctgcgccttgccccagacaaactgaagtcaacagagtctgagcttaag
aggagagagaagagacgtgatgaaatgattgggcttaaacctgtcaggcaaacagtagat
gatctcaaagaaaaggatatacctgacttaagaaacagattgcagactgtcaacagagat
attcaacgccttaaaggtgatctagaagaacaggaaaccctcttgggtactattatgcct
gaggaagaaagtgccaaagcatgtctccaagatattacgcttatggaaaggtaccagact
gatttaagggatgttgaacgaaaaattgctcagcaagctactaagttacagggaatcgat
ttaggccgaactctgctacaagtaagccaggaaaagcaagagaaaaagcatcagtgggat
acagttactggcaaaattgaactgaagcagaatcttaagcaagaccaacaaaatcaagtc
cagcatctaaagagtacagtgaatgagctcaaagcagagaaacttcaaatttccagttgt
atgcaacgtcgacaacagctggaggagcagactgtggagttgaccactgaggttcagtcc
ttgaacagagagatcaaagaagcaaaggaacagatatttcctttgggagcaactttaaaa
aaattacaggaagaaaaagaagagttaatgaacaaaaagaacacaagttataaaatgatg
caggagaagataaatgatgttaaagaaaaagttaaaaatatccataactttgtaaaagaa
gttgagaattacattcaggaagggaaagaagaatacaaacagcaaaaggaatctgaactt
gatgaagttaaagatcagctagtcgaatgtgagaaaaagaaagagaagataaataaagaa
atgggaactattaggcaagatattgatactcaaaagatccaggagcgatggttagaagat
aatcttacattaagaaaaagaaatgaagatctaaaagaagttgaagataacataaagcag
tatttgaaagagatgggagaattgcaagtcccgcaactgaaaaaggaccaacagcatttg
gaggagaaaatagaagatttgaaaagaaaccacagcttggcactgggtcgacagcatgga
tttgaggaagagatccttaggtttaagaaagaactgagagacccacagttcaaggatgca
gaggaggaatacaggaaaaagatgatagttatgagaacaacagagctggcaaacaaggat
cttgacatttactacaaagcactagatcatgcaataatgacgtttcacagcatgaaaatg
gaagaaattaacaagataattcgtgacctttggcgaagcacctacagggggcaagacatt
gaatatattgaaattcgttctgacgcagatgagaatgcatctgcttcagtgaagagaagg
agttacaattacagagtagtaatgattaaaggggacactgctttagatatgagaggcaga
tgcagtgcgggccaaaaggttcttgcttctctcattattcgtctggcactagcagaatcc
ttttgcctcaactgtggaattcttgccctggatgagcctaccaccaaccttgatcgggag
aacattgaatctcttgcacatgccttagtggagataattaaaaatagatcccaacagagt
aactttcagcttcttgtgataacacatgatgaagattttgtggaacttttgggtcgttct
gagtatgtggagaaattttacagaattaagaaaaaccttgatcagtgttcagagattgtg
aaatgtagcgtcacctccttaggatcgtatgttcattag
DBGET
integrated database retrieval system
